UFO06776.5prime Sequence
1036 bp (930 high quality bases) assembled on 2009-08-24
> UFO06776.5prime
CAGTCGACATGTCGGAAAACGCGAAAAACAATAGCTGCCTGCATTGCAGC
GTATTCAGTACGAAATACCAGTACCAGGAGATCTTCGATGAGTTTGGAAT
CGAACTGGGACTGCAGTCCCTGCTGTCCAGGCATTACCAGCTCGAAGTGT
CGCCCGATCCGCAGAAGCAGCAACTCCTGTGCGAAGTGTGTGTCACCAAT
CTCATTCGCCTCTTTGACATCGATGAACTGGAAAGAGAACGGGAAGCTGC
GAAGGATGCGGCCCAGGGCAAAGATTCCAAGGCAGAGGAGGACCCCATTA
TTATTACCGAGGTCCAGGCAACTCCACCAGCTGCGAAACCAGCCAAGAAA
ACAGTGCCTTCAAGGCCCCTGACTAAGGTTCTGCGACCAGTGCCCATTAT
TCCCACCCGGGAACCGAGTGCCCGGATAAGGAATAGAGCGGCTGCTGCTT
CCAATGTAACGCCTGATACATCTAGATCTCCAGAGCCACCAGAGACGCCT
TCCACCGAAGATGCTGTTTCCAAAAGTGAGCCAAAACTGGTTTCTAAAGT
AGCAGATCAGGAACATTTTAGTGTGCTTATACAAAATATTCTGGACGAAG
AGGAAGCTGTTGTTGAGGATGAGACCGCAGTGAAAGAGGAGTCCAGTGAA
GCTGTCCAGGTCACAGAGGAAACAGAAGCCCCTGGCCAAATAGTCATCCT
AAACAGCGAGGCTGTGACAGACACCAATCCGGATGAGAATGTTTACATAT
ACGAGCATGAGGATGTTATGGATCCAAATTTGGACAATGTTAAGTAAAAC
CCATAAGTTGTTCGTCTAGATTGGTAGCTCAAGCTGAGAAGTCAAAGCGA
TGATGACATCGACGAGGGAGAGACTAGCATGTTGTTCTGTTTACTTTGTG
GACATCAAAGAGAAGATGAAGTGATAATATTCGGAGTACTGGCCACGTGT
GAGACGAGCTTTGAAAGCTGACTTCATGTGCACTGGTGTGCAGCCCTGCT
TCTCTGAAATGTCCCAATCGAAGCTTTTAGTCCTTG
UFO06776.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18011-RA | 3329 | CG18011-RA | 48..1071 | 9..1016 | 4635 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10142385..10143138 | 9..762 | 3770 | 100 | Plus |
| 2R | 25286936 | 2R | 10143192..10143348 | 762..913 | 570 | 96.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:00:28 has no hits.
UFO06776.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:44 Download gff for
UFO06776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18011-RA | 46..1090 | 9..1032 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:11 Download gff for
UFO06776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18011-RA | 48..1092 | 9..1032 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:34 Download gff for
UFO06776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18011-RA | 48..1092 | 9..1032 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:34 Download gff for
UFO06776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10142385..10143138 | 9..762 | 100 | -> | Plus |
| 2R | 10143193..10143348 | 763..914 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:11 Download gff for
UFO06776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6029890..6030643 | 9..762 | 100 | -> | Plus |
| arm_2R | 6030698..6030853 | 763..914 | 96 | -> | Plus |
