Clone UFO06782 Report

Search the DGRC for UFO06782

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:67
Well:82
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptEts96B-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO06782.5prime Sequence

1107 bp (1021 high quality bases) assembled on 2009-08-24

> UFO06782.5prime
CAGTCGACATGACAATTTCCTGGCGCGCCTTGTCTCATTTCCTTATTCCG
CAGAGCGACTACGGCGAGGCCAAGACGCACCTGGAGCAGCTGCAGCAGAC
GCTCACGCACCTGGACCACCCGCACCACCACCACGCACACCATCCGCACC
ACCACCTGGGGCTCTACCATGGCGCCCTGCCCAACACATCCACCATAACC
ACAGACTCGGTGGTTTCCTGTGTCAGCTCCACACTGCCGGCGGTGGCCAA
GGCCATTTCCGCATCCTCCAGCTGCGATGGCCTGCAGTCGGAGCGCAAAA
AGTGCCCCATCAGCGATCTGGATTCAGGTGGTCATGGTCATGGTCAGGGG
CATGGCCTCATGGAGGCCATCTGCGCTGGCCAGAAGACGTCACCTATACC
ACCGCCGCCACCACCTTGCTGCTTGACCCTGGGCGAAAGCTCATCCTCGC
CGAATCCCATCGCCACGGCCGCCTTGATGAACGCTTCCACCTCCGGATCC
TCGAGCGCAGGCGGAGCAAGTGCCTCTCTCTGCAACGATCTCACACGGGA
ATCTTCCTGGTACGCCCACCATCATCATCACCACCATCACCATCACCATC
AGTTGCCCGACGAGCTGGTCATGTATGCCACGCCCACTCCCACGCCGGCA
ATCGGGAAATTCGGACTGGACACTTCCACCGAGGGTTACTTGAACGCAAG
GTACAATGTGAATGTCAAAGGCGTGCGGCATGATAGAACATCGAGTTTCT
TTGACATACCCGCTGTGACGCACCCGCACAACCATCCACACCCACATCCG
CACCCACATCCGCACCCGTACTGCTACAGATTTCCATCATCGCCACCCGC
GGGCATTCTGAAAAGAGCGACGAAGAGCAACCTCGGCCGCCGTATACTGC
AGCGACGTGTCCTCCGGGACAGCACTTTCCGCACCACACAAAGATCGGAG
CACGGCGGACTCCACCACTACGGCGGCACAGCAGCACAGCAGCAGCAGGA
GCACAGCAGCAGCAGCAGCAGCAGCAGCAACACGCACACAGCACACTGCA
GCAGCTGCTGCACTGCATCCGCACACATCACTCCCCACATGCCACAGGCA
TCAGCAG

UFO06782.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
Ets96B-RB 3003 CG6892-RB 364..1451 8..1085 5040 98.4 Plus
Ets96B-RC 2804 CG6892-RC 210..1252 53..1085 4815 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24792724..24793253 8..537 2650 100 Plus
3R 32079331 3R 24793378..24793549 537..708 860 100 Plus
3R 32079331 3R 24794323..24794444 708..829 610 100 Plus
3R 32079331 3R 24796124..24796279 876..1032 530 96.2 Plus
3R 32079331 3R 24794593..24794642 827..875 200 98 Plus
Blast to na_te.dros performed on 2014-11-28 20:29:57 has no hits.

UFO06782.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:00 Download gff for UFO06782.5prime
Subject Subject Range Query Range Percent Splice Strand
Ets96B-RB 358..1462 1..1095 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:14 Download gff for UFO06782.5prime
Subject Subject Range Query Range Percent Splice Strand
Ets96B-RB 358..1462 1..1095 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:33 Download gff for UFO06782.5prime
Subject Subject Range Query Range Percent Splice Strand
Ets96B-RB 358..1462 1..1095 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:33 Download gff for UFO06782.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24792718..24793253 1..537 99 -> Plus
3R 24793379..24793549 538..708 100 -> Plus
3R 24794324..24794444 709..829 100 -> Plus
3R 24794596..24794642 830..875 97 -> Plus
3R 24796123..24796352 876..1095 91   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:14 Download gff for UFO06782.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20618440..20618975 1..537 99 -> Plus
arm_3R 20619101..20619271 538..708 100 -> Plus
arm_3R 20620046..20620166 709..829 100 -> Plus
arm_3R 20620318..20620364 830..875 97 -> Plus
arm_3R 20621845..20622074 876..1095 91   Plus