UFO06792.5prime Sequence
1080 bp (972 high quality bases) assembled on 2009-08-24
> UFO06792.5prime
CAGTCGACATGGACACCGCCGGAGACATGGATCACCTGGCCAGTGTGTCC
TTCGGCGACTTTGAGACAAAATCCCCAGAGGGCGACGTATCCTGCTATCA
GAACTTTCGGGCACAGACGGAACATGTTTCGCTAGACATTTCTCTCGGGC
AGAAGTCAGACACTCTATTTGCCGCCGACCAAACGCCCACGCCTACGCGA
CTCATCAAGAACTGCGACGAGGTGGGTCTCTTCGAGGACCTGCAGCACGT
AAATCCATTTGACATTGGATTCCAGCAAGCAGCGGAGCGAAATGTCAGCG
GCACTCCGAGTCGCCCAGAGGCTCGACCCAATGACGGTGAGTCCCTGCAC
ACGCCCCAGGTGTATCCCGTCGAGGCCCCCACCGTGGTATCAGTTCCGTC
TGAAAATCAGGTCCCACAAAGTGTCAGCTGCGGCGATATGGATGTGGACC
AGCTTCTGGCCACGACAGTTACCTCGCCTTCCAAAGCCAGTCAAGATGGT
CCGCCGCCGCTGCAGTTGATCCAGCCCCAGGTCCTAACATGGGTGCTGCC
TGCGCAGTCAGTTCCCATTTCCATCGCTACAGTTGATTGTAACAGAAACA
GGGTGAAGCCGACTGGTGCCATTCATCCCTTCATACTGCCGAAACCCACT
GCGAAAGAATTAAACAAGACCAGTAAAAGACCCGAGCCTATTTTGGTCAG
TTGCAACCCACCTAATAACGAGCCCAGTAGCGCCAGTCTGACGCCCACCT
CACAGCTGCCCATCAAGGAGCGATTGAAGGCCATTATCCACAGCAATAAT
AACAGACGAAGTTTCTCCACACCGCCCAACGCTGCGAAAGCAAAGGATCG
CAGTCGGGACGAGGATTGTATGGAGCGACGAGAGCAGCAGCCTCCTCGTT
ACCGTACAGATGCGAAACGAGCATAACGACCTCATCAAACAGACGCCCAG
CTGCAGCAGAGATCAGACTGCACGAAGAACTTTCAGATAGAAAGACTGCA
GCAGCCCAGGAGTCCAGCAGCTACTGCGATGCGCCGCCGAACATCATCGC
TGTATGATCGCAATGAACAGAATGCTTTCT
UFO06792.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atf-2-RA | 1349 | CG44246-RA | 100..1129 | 6..1022 | 4715 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24870207..24871163 | 6..959 | 4530 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:29:45 has no hits.
UFO06792.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:36 Download gff for
UFO06792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atf-2-RC | 136..1181 | 1..1031 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:04 Download gff for
UFO06792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atf-2-RA | 95..1140 | 1..1031 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:25 Download gff for
UFO06792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atf-2-RA | 95..1140 | 1..1031 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:25 Download gff for
UFO06792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24870202..24871199 | 1..989 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:04 Download gff for
UFO06792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20757725..20758722 | 1..989 | 98 | -> | Plus |
