UFO06793.5prime Sequence
1055 bp (963 high quality bases) assembled on 2009-08-24
> UFO06793.5prime
CAGTCGACATGACGCATCTGCGGTCGGAGGATAAGCCACAGTCGGAGGAG
CGGAAGTCTGTGTTCAAGGAGAGCAGCTGCATCTTCCGGCGGAATCGAGC
CCTCGGCTATGTGAGCAACCAGGTTCCAGCAGTCACCCGCTACGTGCAGC
GTCGTCGGGACACTTTGCTGATCACCTGCATCGGCAGATCTTTTCAGGTG
TACACCGCCAACCACTTTCGCCTGCTGCACGTTAGCGGATTGCATCCGGA
CGAGATTACGGCTCTGGCCACGGATCGACTGCACACGTACACGGCGAGCA
ACAAGTGTATCTACGCCTGGCGGGCGGGCAAACACATCCGGCACGTGTAC
CGTGGCCACCAGAAAGATGTCCACCTCCTGCTGCCTTTTGGTTCCAGTTT
GATAGCCATCGATAGGCAGAATGTGTTAAAAGTGTGGAATATTTCAACCG
AGGATGTCTATTTGGAAGTGCCCTTCCGGTCTGAGGAGTTCCAGATCACA
GCTGTGACCCATCCGCCCACGTACATCAATAAAATAGTACTAGGCTCCCA
GCAGGGCCAACTAAAGATCTTGAACATAAAGAAGAACAGTGTGGTGTGCA
CTTTGAGTCACCACGACAGCAGGATCACCTGCATTGAACCGTCCCCTGCT
TTGGATGTCGTGGCCGTGGGACACGGGGATGGCACTATTATCTTGCTTAA
CCTTAAGTTCGACGAGGTGCTTATGAGCTTCCAGCAGATTGGGGTCAGGT
CACCAACCTTTCCTTCCGTACCGACGGCCCACCAATCCTTGTGTCCGCCT
GCAGCAATGGTTACATGGCCTTCTGGAACCTGGAGGAGCGCAAGTTAGCC
GGTCAGCTGCAAGCGCACGAGGAGTCGGTGACCACGGCCATTTGTCTGCC
AGCGAGCCCGTGGTCTTCACCACTTCACAGACATTCATGAGATGTTTGTT
TTCGATATGCCAGATGGTGTGCAGACAGCTGAGATCCGCGAGGACCCACA
AGCCGCGTTTTGTTTTCGCCTACACGCAGCTCGGCGTATCATTCCTCTCT
TCGGG
UFO06793.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9799-RA | 2939 | CG9799-RA | 109..1169 | 9..1055 | 4835 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13387635..13388601 | 969..9 | 4540 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:04:02 has no hits.
UFO06793.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:35 Download gff for
UFO06793.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9799-RA | 100..1145 | 1..1034 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:26 Download gff for
UFO06793.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9799-RA | 102..1147 | 1..1034 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:29 Download gff for
UFO06793.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9799-RA | 102..1147 | 1..1034 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:29 Download gff for
UFO06793.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13387563..13388608 | 1..1034 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:26 Download gff for
UFO06793.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9213285..9214330 | 1..1034 | 98 | | Minus |