UFO06801.5prime Sequence
154 bp (154 high quality bases) assembled on 2009-08-31
> UFO06801.5prime
CAGTCGACATGGACGACTTAAATCCGCTGGCGGGCACTGCTCACCTCCTG
GAAGAGGTTGACAAGAAACTGATGGTACTTTTGAGAGACGGACGGACTCT
GATTGGATACCTGCGGTCCGTGGACCAGTTCGCCAACCTGGTGCTGCAAC
GCAC
UFO06801.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LSm1-RA | 588 | CG4279-RA | 78..224 | 8..154 | 720 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21170395..21170485 | 154..64 | 455 | 100 | Minus |
2R | 25286936 | 2R | 21170540..21170595 | 63..8 | 265 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:41:59 has no hits.
UFO06801.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:03 Download gff for
UFO06801.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4279-RA | 46..197 | 1..154 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:03 Download gff for
UFO06801.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LSm1-RA | 73..224 | 1..154 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:14 Download gff for
UFO06801.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LSm1-RA | 73..224 | 1..154 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:14 Download gff for
UFO06801.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21170395..21170485 | 64..154 | 100 | <- | Minus |
2R | 21170540..21170600 | 1..63 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:03 Download gff for
UFO06801.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17057900..17057990 | 64..154 | 100 | <- | Minus |
arm_2R | 17058045..17058105 | 1..63 | 93 | | Minus |