UFO06803.5prime Sequence
1118 bp (1011 high quality bases) assembled on 2009-08-31
> UFO06803.5prime
CAGTCGACATGTCCTCCGATTCCACGCTGTACTTCAGTGCCGTCGAGGAT
ATGTTCAAGGAAGTGTTAACAATAGGGGACGAGAAGAGGGATCCTGGAAA
CGAGGATTTCTCCGAAACACCTAAACGTTGCGTACGATTGCGCCAGCAAA
AGTTGTTCGCGAACGATACCGCGAGTTTTGTGATAGGTCGCCGTTCGCCG
AGGATTGAATCCAAAATCGATCTCAACAGAGATGTATCTCCTGGAAGGCG
AAAGGAGCTGCGCGGCGAGGAAATCCTTCGGATGCGCAAGGATCGGGCGG
AAAAGGAGCGTCTGAGGCCCCAAAGGCGTCTTACCATGCGGATTGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGC
GTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAA
CAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCA
TCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATC
ACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGC
CTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCC
ATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGG
CTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGG
TTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCG
GAAATCGTCGTGTATTCACTCAGAGCGATGAAAACGTTTCAGTTTGCTCA
TGGAAACGGTGTACAGGTGACACTATCCCATATCACAGCTCACGTCTTCA
TGCATACGAAATCGATGAGCATCATCAGGCGGCAGATGGTGATAGCGATA
ACCTGTGCTTATTTCTACGTCTAAGCCGTAATCAGCGGAACGTTGGTTAG
GTCTGGACCACTGACTGA
UFO06803.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13454-RA | 524 | CG13454-RA | 31..366 | 9..344 | 1680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15516691..15517026 | 344..9 | 1680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:41:22 has no hits.
UFO06803.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:25:52 Download gff for
UFO06803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13454-RA | 17..362 | 1..344 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:51 Download gff for
UFO06803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13454-RA | 21..366 | 1..344 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:53 Download gff for
UFO06803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13454-RA | 21..366 | 1..344 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:15:53 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:53:51 has no hits.
