UFO06806.5prime Sequence
1129 bp (1014 high quality bases) assembled on 2009-08-31
> UFO06806.5prime
CAGTCGACATGACAGCAGCGAAACTGAGGTCAACACTTGGCTTTGCGTGC
GCAAAAGGCAGGCCAAAGTCAAACGGAAATCTGCATAAGACCCTCCAGTT
GCGATTGACAGTCCTTGAGATGTTTCCACTCAGTTTCCCATGTCTGTGGC
CTCTGACAGAACCTGAACAGCAAACCGAGCACCAAAACATCGAACAGCTG
GGTGGGCAATTAAAAGGCATTCCAGAGGTCAGCATAAATGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATT
GGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGA
CGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCA
CCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATC
GTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGA
AAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCT
TTCATTGCCATACGAAATTCCGGATGAGCATTCATCAGCGGGCAGATGTG
AATAAGGCCGGATAAAACTTGTGCTTATTTTTCTTACGTCTTAAAAGCCG
TATATCCAGCTGACGTCTGTTATAGTACATGAAGCACTGACTGAATGCCT
CAATGTCTTACGATGCATGGCATATCACGGTGAATCATGAATTTTTCCAT
TTAGCTCTAGACTGGAGATCTACTCGTAG
UFO06806.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:54:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18740395..18740625 | 239..9 | 1155 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:54:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 808..875 | 123 | 68.1 | Plus |
UFO06806.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:04 Download gff for
UFO06806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30121-RA | 805..1035 | 9..239 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:32:38 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:32:38 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:55:03 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:55:03 has no hits.
