UFO06816.5prime Sequence
1137 bp (1034 high quality bases) assembled on 2009-08-31
> UFO06816.5prime
CAGTCGACATGACCAATGGCGAATACAACAATTGTTACATGTACGACGTC
AACTATACGGATATACTTGCCCAGGGCAAGGTGATGGCCGATCCCAAGTG
GCCGCAGGTCAAGTGCCGCCACGGCTGGTCATATAACTTCACGGAAATAC
CCTACGCGACGGTGGCCACCGAGCAGAATTGGGTGTGCGATGACGCCGCC
CTGCCCACCTACGCCCAGTCCATATTCTTTCTGGGCGCCATCGTGGGAGG
ACTGCTCTTTGGCTGGGTGGCGGATCGGTTTGGTCGTATTCCCGCCCTGA
TCGGCACCAATATGATGGGTCTCCTGGCCGGCGTGGGCACTGCCTTTGTC
AGCAACTTCTGGGAGTTTGCTATCATGCGATTCTTCGTCGGATTCGCCTT
TGACAACTGCTTCACAATGATGTACATATTGGTTCTCGAGTACGTTGGTC
CCAAGTACCGCACCTTTGTGGCCAATATGTCGATCGCTATCTTCTTCACT
GGAGCCGCCTGCCTTCTTCCCTGGATTGCCTACTTTTTGGCAGATTGGAA
ACTCCTGGCCATCGTGACCTCTGCTCCGCTACTTTTGGCTATATTCACCC
CATTCGTGGTACCCGAATCAGCTCGTTGGTTAGTCTCCCAGGGAAAAGTG
GACAAGGCCGTGGGAATCCTGAAGAAACTTGAGAAGGGCAATGGGCGTCA
GGTGCCCCCTCAGACATATCAAATCTTTACGGACAGCTGTAAGAGGATGC
AGGAGCAGGAGGCCCAGAATGGCAAATACTCTGTACTGGATCTCTTTAAG
TCACCAAGATTGCGGCGAACTACTCTGCTGCTTATTGTTATCTGGATGGC
CATATCCCTAGTCTTCGATGGACATGTGAGGAATGTGGGATCACTGGGTT
TGGACATCTTCTTCACCTTCACCCTGGCCTGTTTCACGGAGCTGCCCGCC
GATACTTTGCTTACGTGATCCTGGATCGGTTCGGACGCCGTTGGTGCCTG
CAGCTCCATGGTCCTTATGGAGTGTTCAGCTTATTGGCCACTGTGGGTGC
CCGTGGCCATATACTCGCTGCCTGCCATCATGGGTCGAATTCTTTGTAAC
ATAGCTATATATTGACTGCATGGGCGGCGAAGTCTGC
UFO06816.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42269-RE | 2362 | CG42269-RE | 613..1744 | 8..1129 | 5295 | 98.5 | Plus |
CG10486-RB | 2288 | CG10486-RB | 894..963 | 407..476 | 185 | 84.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6070220..6070892 | 432..1099 | 2980 | 98.5 | Plus |
3L | 28110227 | 3L | 6069468..6069892 | 8..432 | 2125 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:30:16 has no hits.
UFO06816.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:01 Download gff for
UFO06816.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42269-RE | 408..1535 | 1..1120 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:29 Download gff for
UFO06816.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42269-RE | 607..1734 | 1..1120 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:42 Download gff for
UFO06816.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42269-RE | 607..1734 | 1..1120 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:42 Download gff for
UFO06816.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6069462..6069892 | 1..432 | 99 | -> | Plus |
3L | 6070221..6070917 | 433..1120 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:29 Download gff for
UFO06816.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6062562..6062992 | 1..432 | 99 | -> | Plus |
arm_3L | 6063321..6064017 | 433..1120 | 97 | | Plus |