Clone UFO06816 Report

Search the DGRC for UFO06816

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:68
Well:16
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO06816.5prime Sequence

1137 bp (1034 high quality bases) assembled on 2009-08-31

> UFO06816.5prime
CAGTCGACATGACCAATGGCGAATACAACAATTGTTACATGTACGACGTC
AACTATACGGATATACTTGCCCAGGGCAAGGTGATGGCCGATCCCAAGTG
GCCGCAGGTCAAGTGCCGCCACGGCTGGTCATATAACTTCACGGAAATAC
CCTACGCGACGGTGGCCACCGAGCAGAATTGGGTGTGCGATGACGCCGCC
CTGCCCACCTACGCCCAGTCCATATTCTTTCTGGGCGCCATCGTGGGAGG
ACTGCTCTTTGGCTGGGTGGCGGATCGGTTTGGTCGTATTCCCGCCCTGA
TCGGCACCAATATGATGGGTCTCCTGGCCGGCGTGGGCACTGCCTTTGTC
AGCAACTTCTGGGAGTTTGCTATCATGCGATTCTTCGTCGGATTCGCCTT
TGACAACTGCTTCACAATGATGTACATATTGGTTCTCGAGTACGTTGGTC
CCAAGTACCGCACCTTTGTGGCCAATATGTCGATCGCTATCTTCTTCACT
GGAGCCGCCTGCCTTCTTCCCTGGATTGCCTACTTTTTGGCAGATTGGAA
ACTCCTGGCCATCGTGACCTCTGCTCCGCTACTTTTGGCTATATTCACCC
CATTCGTGGTACCCGAATCAGCTCGTTGGTTAGTCTCCCAGGGAAAAGTG
GACAAGGCCGTGGGAATCCTGAAGAAACTTGAGAAGGGCAATGGGCGTCA
GGTGCCCCCTCAGACATATCAAATCTTTACGGACAGCTGTAAGAGGATGC
AGGAGCAGGAGGCCCAGAATGGCAAATACTCTGTACTGGATCTCTTTAAG
TCACCAAGATTGCGGCGAACTACTCTGCTGCTTATTGTTATCTGGATGGC
CATATCCCTAGTCTTCGATGGACATGTGAGGAATGTGGGATCACTGGGTT
TGGACATCTTCTTCACCTTCACCCTGGCCTGTTTCACGGAGCTGCCCGCC
GATACTTTGCTTACGTGATCCTGGATCGGTTCGGACGCCGTTGGTGCCTG
CAGCTCCATGGTCCTTATGGAGTGTTCAGCTTATTGGCCACTGTGGGTGC
CCGTGGCCATATACTCGCTGCCTGCCATCATGGGTCGAATTCTTTGTAAC
ATAGCTATATATTGACTGCATGGGCGGCGAAGTCTGC

UFO06816.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG42269-RE 2362 CG42269-RE 613..1744 8..1129 5295 98.5 Plus
CG10486-RB 2288 CG10486-RB 894..963 407..476 185 84.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6070220..6070892 432..1099 2980 98.5 Plus
3L 28110227 3L 6069468..6069892 8..432 2125 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:30:16 has no hits.

UFO06816.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:01 Download gff for UFO06816.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42269-RE 408..1535 1..1120 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:29 Download gff for UFO06816.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42269-RE 607..1734 1..1120 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:42 Download gff for UFO06816.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42269-RE 607..1734 1..1120 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:42 Download gff for UFO06816.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6069462..6069892 1..432 99 -> Plus
3L 6070221..6070917 433..1120 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:29 Download gff for UFO06816.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6062562..6062992 1..432 99 -> Plus
arm_3L 6063321..6064017 433..1120 97   Plus