UFO06818.5prime Sequence
391 bp (391 high quality bases) assembled on 2009-08-31
> UFO06818.5prime
CAGTCGACATGGATATTGAATTACCTTATCTTGCTGAGTATGCAAGAACT
GGACGAGCCACTTGCAAAGGATGTAAAAGTACTATATCTAAAGATACTCT
TCGGATTGCTGTCATGGTTCAATCTGCATTTCATGATGCCAAAGTTCCGA
ATTGGTTTCATAAAACCTGCTTTTTTAAAAACCAGCGTCCCAGCTCAGTA
GGAGACATACAAAACATTGGAAATCTCCGATTTGCCGATCAAAAGGAATT
AACGGATCTTGTGGAAAATATACAAGAAGTTATAAGCGCACAATTAGGAA
AAAAGCGATCGAAGGCTTTTAACTTAGCATTAAAAGACTTTGGGATTGAA
TATGCAAAATCTAGTCGATCGACGTGTCGTGGATGTGAACA
UFO06818.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Parp-RB | 3112 | CG40411-RB | 76..458 | 9..391 | 1915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 3585369..3585510 | 264..123 | 710 | 100 | Minus |
3R | 32079331 | 3R | 3585187..3585314 | 391..264 | 640 | 100 | Minus |
3R | 32079331 | 3R | 3586866..3586979 | 122..9 | 570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:52:37 has no hits.
UFO06818.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:00 Download gff for
UFO06818.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Parp-RA | 496..882 | 3..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:17:04 Download gff for
UFO06818.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Parp-RB | 72..458 | 3..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:35 Download gff for
UFO06818.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Parp-RB | 71..457 | 3..390 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:35 Download gff for
UFO06818.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 3585188..3585313 | 265..390 | 100 | <- | Minus |
3R | 3585369..3585510 | 123..264 | 100 | <- | Minus |
3R | 3586866..3586984 | 3..122 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:17:04 Download gff for
UFO06818.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3RHet | 1936750..1936891 | 123..264 | 100 | -> | Plus |
3RHet | 1935276..1935394 | 3..122 | 97 | -> | Plus |
3RHet | 1936947..1937072 | 265..390 | 100 | | Plus |