UFO06829.5prime Sequence
1102 bp (1007 high quality bases) assembled on 2009-08-31
> UFO06829.5prime
CAGTCGACATGAGCGCGGATGCGAGAATCAAGCAGATGGCGCCATCGCTG
GACACCACCGAACGGGAGAGGGAGCACCAGAACGTGGATGCCACCAACTC
GAACTCGGAGCCCAGTGCCAGCGATTGGGTGAACTTCTCGCAATGGATGC
ACTGCTTCTGCGTGGTCACCTTCGATCTAAATCTTGGGCAGGCGCTGGAG
CACGTCTATCCGCCGGCTTTCATGCCCAGCGACCAGGAGGTTAGCAACAT
TTGCTACATGGCCTTCCCGGACTCAAATTCCGGCTGCATGGGCGACACCA
AGTTCCACATGCGATTGCGCTGCACAACGCGTCGGGATTCCTTGCCGGGC
TACAATGCGGAATGCTCGCCGGCGCTGCGACAGGATGGCTCCCACTACTG
GGGCTTCGTCTACTTTCGCCAGAAGCGGGACGCGAATCTGCCGCGTGGTT
ACTTCCAGAAGAGCTTTATAATCATTACACGACTGCCGTTCTTCAATCTG
TACTACGACATACTCTCCCAGCTGGCGCCGCGCTACTTTGAGGAGGGCAC
CGACGTCCTGCGTCTGGCCAGCGAGCAAATTAATCGCCAGTGGCCCGGCC
TGCGAGTGGGTAAGCCGCTCCAGCTGCCTCTGCTGGATTGCAGCTATCAG
ATCTGCATACCGCGGACCAGCAGCAGTCGAAAGTCGACGGCCGATGGAGG
CATCGCAGGTGGTGCGGTGGAATCGCCACCAGCCATGGCTGCTTGCCCGG
CAGCCAAAGTGCTGGCCTCCGTTAATGAAATCGAACTCTTCCGCTCCCTG
GACTTTGTCATGGAGCAACTGTACACGCTGTGGGAGCTGGTCATCACCGC
CGAGCCCATTGTTGTCGTTGGCACCTCACCCGCCGACTGCTCCCACATGG
TGCAGACCCTTCTGGCCATGATGCTCCGCTGGAGTATTGCGCCGAGGCGC
GTCCCTACTCACCATTCACGACAGCGATTTCGCGATTCACACAGAGTGCA
GCAGCAGAACCACACTGCCCGCCTGCATTTGGGCGTCACGATCGTCTTTG
TGAAGCTCCTGAGATGCCGCAATGCTGCACTGTGAAACGAGACTGCAGAG
CA
UFO06829.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3309-RB | 2611 | CG3309-RB | 79..1141 | 9..1062 | 5060 | 99 | Plus |
| CG3309-RA | 2614 | CG3309-RA | 79..1141 | 9..1062 | 5060 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5328231..5329269 | 1041..9 | 4865 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:41:47 has no hits.
UFO06829.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:25:53 Download gff for
UFO06829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3309-RA | 64..1143 | 1..1071 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:00 Download gff for
UFO06829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3309-RA | 78..1157 | 1..1071 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:06 Download gff for
UFO06829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3309-RA | 75..1154 | 1..1071 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:06 Download gff for
UFO06829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5328194..5329273 | 1..1071 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:00 Download gff for
UFO06829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5222227..5223306 | 1..1071 | 98 | | Minus |
