UFO06831.5prime Sequence
1112 bp (997 high quality bases) assembled on 2009-08-31
> UFO06831.5prime
CAGTCGACATGCGGCCCAATTTGTTTTCCGGCGCCTCGCGGCTCTTGACT
TACAGCCGAAATGGAAAACTTCTGACTCGGGGAAGAAGCACCAAGGCCAC
GTCCAGCAGCTTGGACTCACAGCACCAGGATGCGGCGACCACGGAGGGTG
GAAGAGCGGAATCCGTAGAGGAGTCCCCGGAGCAGCAGCGAAAACTACCA
ACCAGAGAGCCGCTGGCCAAAAACTTCTTCATCGGAGTGGTGGACAAGGA
GCTGCTGGCCTATCCGGAGGTGATTCCACGGGATGAGATGGCCCAGCTGG
AGAATTCCCTGCTGCCGCTGAAGAACTACTTTGTGGAGCCACGTGAAACG
GAGGAGACCTCACCGGAGACCCTCCGCCAGCTGGGACTCTATGGGCTAAA
TGTGTCCACAGATTACGAGGGCAAAGGCTATGGCTGGAGTGCCAGTCTAA
TGGCCAGTGAGCCGGATTCAACGGATATCAATGTAACCCTGGGCCTGCAA
ACGCATCGCGTGGTCGTGGATCTTCTGAAAGAGGTTGGAACTCCGTTGCA
ACAGCAGAGGTATCTCCAGGACTTGGCCACTGGTAAACTGATAGGTACCG
AGGCTATATATGAGATATCTCCACCCGAGGAGGATTACTTTAACACCACG
GCAGAGTTGTTTCCCGAATACGGAAAGTGGCAGCTCAATGGCGAAAAATC
ATTCGTGATCTGCACACCCGGCGAGCGGCAGCTTTTCCTGGTTCTGGCCC
AAACCCAACAGCCGAATGTTCCGGGAGTTTTGGGACGTGGCACCACCATC
TTTCTGGTTGATTCCCAGCAGGAAGGAGTGCGCCTGGGCGAAAAGCACGC
CACATTCGGTTGCCGGAAAGCGGAAATTAGCGTGTGCACTTCGAAGGGTT
AAGTTGGGAGAGGATCAGTGGTGGGCCTACCACACGATGGCACCGCTATT
CGGAGCAGCTGGTGCGATCCTTCCCGCTTGAGGGGCAGCTTGGTGGGACT
TTCGCTGGCCAAGAAACTGCTAACGAATTGTCCAGTACACTGGTGAACAC
CACCTCAGGCGGAATACACTGCAAGACCTGGGAGCTCACCCGCATCATTG
TCCGCGGCGATT
UFO06831.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Egm-RA | 2033 | CG9006-RA | 53..1144 | 9..1096 | 5135 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11617954..11618971 | 1023..9 | 4830 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:06:37 has no hits.
UFO06831.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:25:51 Download gff for
UFO06831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Egm-RA | 32..1148 | 1..1112 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:04 Download gff for
UFO06831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Egm-RA | 45..1161 | 1..1112 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:01 Download gff for
UFO06831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Egm-RA | 45..1161 | 1..1112 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:01 Download gff for
UFO06831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11617902..11618978 | 1..1073 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:04 Download gff for
UFO06831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7505407..7506483 | 1..1073 | 98 | | Minus |
