UFO06851.5prime Sequence
1103 bp (1003 high quality bases) assembled on 2009-08-31
> UFO06851.5prime
CAGTCGACATGGACTTTGACAATGCGAAAGAGAACATTCAGCCGCTGGCC
AGCGGTCGCAATGTGAGCCTTCTGCAGGCTTCTCTTAGCCAGGACTCCAC
CCACGGCCAGGAACTGCTGGCACAACGCAAGCAAATGGAGGAGGAGGTGC
GCACCTACAAAGGCGCGGATCCTCTCGGTGCCTGGTACACGTTCATCTGC
TGGATCGAGCAGAGCTATCCGGCGGGGGGCAGTGGCTCCGGTCTGCAGAC
TGTCCTACACCAGTGCCTCACCAAATTTGAAGACGACGAGCGCTACCGTC
AGGACAAGCGGCTTATAAAGCTTTTCATTAAATTCATGGAGAAACAGAAG
GACAAGATCGAGTTTTATCAGCAGATGTACAACAACGGGATCGGAACAAT
GCTGGCAGATTTCTACATTGCTTGGGCCTACAGCTACGACCTGAGCGGTA
ACATGCGCAAGGCCGACGAGATCTTTCGCTTAGGTCTAGAGTGCCGCGCA
GAGCCCTTAGAGGATCTGAAGGAGGCCCACCACCACTTTGGCTATACGGT
GGGCCAGCGCATGCTCTACAGCACTGGTGAAGAGGCCAACGCAGTAAACC
AGGAACTTAACGAGCGACGGCTAGCACTGCAATCACTTCATGGTCGCCGG
CAGCAGATCTCTAACAGCATCACCGTGGGCAGCATCCGTACCGGAGCAGC
AGTTAAAAGCGGCCTCCCAGGCGTGGTTCAGGTCGAGCCTTCAACCACCA
CCAGTAGCGCAATGTAGTCGGAACGTTGAGGTGTTTAATGACGAAAATTC
TGAGGGAAATATTCCGATCTCTAATTCTGAGACGGAGTGAAGTCAAGCCT
GCGATCCATTATCGACTCGGCTTGCAGTCAGGAGATATAAAGACCGGTGG
CCTGATACGCAAATGCTAAACGCCACAAACATGGAAAATTTCGGCAGTAC
GCTCGCGGATCTGGGCTTTGATATACACGTGACGACAGCATGCCACCTAT
ACAACTACGAGCGTCGTCTAGACATCATTTAGATTTCGACACTTGTGGCA
GAACAGCCTCAGACGTGGGTGACCAGTTACATTGAGGACGACCAAGCATG
GAC
UFO06851.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BubR1-RA | 4626 | CG7838-RA | 99..1220 | 5..1091 | 4750 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5973496..5973893 | 733..336 | 1990 | 100 | Minus |
| 2R | 25286936 | 2R | 5973957..5974287 | 335..5 | 1640 | 99.7 | Minus |
| 2R | 25286936 | 2R | 5972859..5973124 | 980..729 | 720 | 91.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:20:29 has no hits.
UFO06851.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:25:36 Download gff for
UFO06851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BubR1-RA | 326..1401 | 1..1049 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:04 Download gff for
UFO06851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BubR1-RA | 94..1169 | 1..1049 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:58:01 Download gff for
UFO06851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BubR1-RA | 94..1169 | 1..1049 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:58:01 Download gff for
UFO06851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5972789..5973121 | 732..1041 | 92 | <- | Minus |
| 2R | 5973498..5973893 | 336..731 | 100 | <- | Minus |
| 2R | 5973957..5974288 | 1..335 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:04 Download gff for
UFO06851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1860294..1860626 | 732..1041 | 92 | <- | Minus |
| arm_2R | 1861003..1861398 | 336..731 | 100 | <- | Minus |
| arm_2R | 1861462..1861793 | 1..335 | 98 | | Minus |
