UFO06855.5prime Sequence
1155 bp (1046 high quality bases) assembled on 2009-08-31
> UFO06855.5prime
CAGTCGACATGGTACGTCAGCAGAAGACCAGCAAGTCCACAAGCTTATCG
AAGCCCACTCCAATTGCCCAGAAGCCCAAGCCAATTGCCCAGAAGCACAC
TCACGGCAATAAGTACCACTACCAGCAACGGAATAAGCAGCCGAATCATC
AGCCGGATCAAGAAATAGGAAGAGCAGCTAAGTGTGAGAATCAGGCTATA
GCCGAGCATAAACAAGATCTAACGGGCATCATAACCCAAGAGCTGTTTGA
AAGTTTCAATAATATTCAAGGTCCGTTTTCGGAAAACCTGCAGGTTTTCA
ACAAAAATCCAGAATATATCACAAGGCGAAAGAAAGAGCTTAAGAAAGAA
GACGATCTAGATCGTGGTCAAATAACGAAGGAAGTCGCTAGGGAAAAACA
GAAGGAAAAAGAAACCCGCGATCGGGCTGTGACGGAAACGATCTTCGTAA
CAATTGAGAACAAAAAGGCACCAGTCATGAATGGACATGGACCAAGGCAC
GTTAAAGTGGCTAACGGACAAGACAAACACAATGACGGCAAACCTCCGCT
GCGTGCCATACTGGGCAACAGTGCTTCGCAGCGCCAGCAAGATACAAGCA
CCGTCTATCACAGCCCTGAATCCTCATTCAAGCGGCCACGTCATCCGCGA
GTAATGTACCCTGGTCACCAGCGCACCACGGGCGTCTCTGTGAATCACAG
ATTGAAAGTAACGCCGCAATCGGATGCACCCACGCCAGCGGTAGCGCCCA
TCACGCCGCCAGCTTCGCCGGAATACGCTCAAACGACAACCGCCGCTAAA
GCGACGTACAAAGAAGATATCCACGGAGGTCAAGGTGAAACAGGCAATGT
CGTTACAAATCCAAAAGTTAAGTGCCACTTAAATTCGATCCCTCACTTGA
TCCCGTCTCCACGCTCAACTTCTATTGCGCGGCAAATGACTTTGAGAAAC
CTGCATACAACATATTCAACAAGCTACGGAACCTACATTGTTCATTGCAA
ATCGCTGGCGATGTTTACAGTAGCTATCCGCAGGAGTTCACCGATAAGGA
GAAAGCATACCACGCACAGCACAGATCGCCATCCAGCGCATCATGCATGC
AGTCACACAAAGCCTTCTGCTGCCATTACGAGTGGAATTATCATGAATGT
ACAAG
UFO06855.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8920-RD | 3272 | CG8920-RD | 435..1553 | 9..1121 | 5420 | 99.2 | Plus |
| CG8920-RF | 3753 | CG8920-RF | 183..1301 | 9..1121 | 5420 | 99.2 | Plus |
| CG8920-RA | 3079 | CG8920-RA | 242..1360 | 9..1121 | 5420 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20321726..20322819 | 9..1100 | 5340 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:37:06 has no hits.
UFO06855.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:22:08 Download gff for
UFO06855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8920-RC | 453..1574 | 5..1121 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:27 Download gff for
UFO06855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8920-RA | 239..1360 | 5..1121 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:23:13 Download gff for
UFO06855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8920-RA | 239..1360 | 5..1121 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:23:13 Download gff for
UFO06855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20321723..20322834 | 5..1112 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:27 Download gff for
UFO06855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16209228..16210339 | 5..1112 | 99 | -> | Plus |
