UFO06869.5prime Sequence
1096 bp (989 high quality bases) assembled on 2009-08-31
> UFO06869.5prime
CAGTCGACATGAATAAAATTACGAGTGCCTTCATAAGAGTTCTGCGCCAG
AGCAGCTCCTCAGGCGGCACAGGCAACCTTCTGGGTCGTCAGCTCTCCTA
CAAGAGCGATTTATCCCTGGACAAGATCTATCCCGGCGCCCGACTGCAAA
TCTACACGCCGCCCCCGCCGCCCAGTGGCAGCGACAAGTTCAGCGGCTTC
ATTCCCATGGACCGACTGGAGATCACCTACAGCAGGAGCTCCGGACCCGG
TGGTCAGCACGTGAACACGGTGAATACCAAGGTGGATGTACGCTTCAAGG
TGGCACAAGCGGACTGGATACCCGAGCAGACGCGCCAGAAGCTGCTCAAG
GTGCTGGCAAACCGGATTACCAAAGACGGCTACTTTTACATCAAGAGTGA
TCTTACGCGCTCCCAGCAAATGAACCTGGCCGATGCGCTGGAGAAGCTGC
GCACCATCATACGCTCCCAGGAGGCTGTGGCACCTGCGCCACCCAGCGAG
GAGACACTGGAGAAGCTGCGCAGGCGCCAGGAGCGAGCGGTCCGCGAACG
TCTACAACTGAAACGTGGTCGCGCCCAAGTCAAAGCGGATCGGCAGGGAC
CGAGCGGATTAGACTTGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCATAA
TCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCAC
CAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGG
AGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGA
TATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCA
TTAGCATTCTGCGACATGCAGCATCACAAACGGCATGATGAGCTGATCGC
AGCGCATCAGCACTTGTCGCTGCGTATATATTTGCCCATGTGAAACGGGG
CGAGAGTGTCATATTGCCACGTTAATCAACTGGTGACTCACCAGAATGCT
GAAACGAAAACATCCATACGTAAGGAATGCAGTACGTACGCCACTT
UFO06869.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6094-RB | 889 | CG6094-RB | 114..722 | 9..617 | 3045 | 100 | Plus |
| CG6094-RA | 735 | CG6094-RA | 74..682 | 9..617 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10507418..10507865 | 170..617 | 2240 | 100 | Plus |
| 2L | 23513712 | 2L | 10507194..10507355 | 9..170 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:00:08 has no hits.
UFO06869.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:57 Download gff for
UFO06869.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6094-RA | 72..692 | 1..626 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:58 Download gff for
UFO06869.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6094-RA | 68..688 | 1..626 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:22 Download gff for
UFO06869.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6094-RA | 68..688 | 1..626 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:22 Download gff for
UFO06869.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10507188..10507355 | 1..170 | 97 | -> | Plus |
| 2L | 10507419..10507871 | 171..626 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:58 Download gff for
UFO06869.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10507188..10507355 | 1..170 | 97 | -> | Plus |
| arm_2L | 10507419..10507871 | 171..626 | 99 | == | Plus |
