Clone UFO06881 Report

Search the DGRC for UFO06881

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:68
Well:81
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG17985-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO06881.5prime Sequence

595 bp (489 high quality bases) assembled on 2009-08-31

> UFO06881.5prime
CAGTCGACATGCGTCGCAATGCGCGCCAACAACAACACAATCAGGAAGAA
ATCGGCCCCGACGACGTGGAAGACATCTTTGCCCGTCCCGCCTACGATGA
CGACGAGTTCGAAGATCTGCTCCCTCTGGCCAGGAGGCCCAATGGCCACG
CCCGACTCGGCCGCTACGAGAACACTCTGGAGGTAAAGGTCCAAGAGGGA
GACACACTCCAGGCGCTGGCCCTGCGCTTTCACTCCTCTGTGGCGGACAT
CAAGCGCCTGAACAAGATCGACCGCGAAAATGAAATCCACGCACATCGGG
TTATTCGCATTCCGGTTACAGTGCACAACGTCCTGCTGGGCAACGGGGGC
CTCGAAGCCCTTCCTGCGGTCCACCGCAGCGGGAACAACAGTCCTAGACA
CAATATTGAGCGGGAACCAGCTCCCGAACGCAATCCCCTCGAGGATGCGC
GGCAATGCTGATGAGCGACTCCTGTGGCGGCGGTAATGCTCAGCGCCGTG
ATCACGAGAAACCATCGACGAGCAGAGCTGCTGACAATTCTACGAGGGAG
CCCAGGTGCCGATGACGAGCATATGGAGCACCCTACGAGAAATGC

UFO06881.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG17985-RA 1479 CG17985-RA 177..773 9..589 2605 97.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7654496..7655037 556..23 2315 98.2 Minus
Blast to na_te.dros performed on 2014-11-28 23:03:38 has no hits.

UFO06881.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:47 Download gff for UFO06881.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17985-RA 186..757 9..568 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:29 Download gff for UFO06881.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17985-RA 177..748 9..568 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:36 Download gff for UFO06881.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17985-RA 177..748 9..568 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:36 Download gff for UFO06881.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7654480..7655037 23..568 97 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:29 Download gff for UFO06881.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3541985..3542542 23..568 97 <- Minus