UFO06893.5prime Sequence
1086 bp (979 high quality bases) assembled on 2009-08-31
> UFO06893.5prime
CAGTCGACATGGGAGACGAGCAGGACAAACGCACCGGCAAGGAGAAGCTG
CTCTTCTACACCACCGCCTTCTTCATCCTGCTGGGCACCTTCAGCCTGTT
CGCCTTCCTCTTCCTGGTGCCCTTCGTCATCGAGCCCGCCTTCACCACGA
TCTTCATGCAGTTCGAGGAGGTTCCGGCGCTCTGCGAAACGTACGACACG
GAGATCTACTACGGGGCCAAGAACTGTTCGTGGTCGTCCTGCCGCGAGGG
CTGCACCAAGGACATCTATACGTGCACCCAGATTCGGGTGAACTACCGTC
TCAATCTATATAACTTCACCGATGAGTTCAACTTCACGGAGTACCACATC
AATCTCAAGGAGGCGGAGCGCATCCTGCCGCCCGTCAAGCGAACGGATCG
CTATGAGAGAGCTCTGAGGAGCGACTACGAGTACGATAATCTGGGTGGTG
GCACCGGCTTGGACATCGACTTAGGCGCCGGCCGGATGGAACAGCTCAAT
TTTGGGGATGCCGACGGCTCCAATGGCTACCTCATTGAGGATTCGGAGGA
TACGCGCGGTCTGAGCGCTTCGGGTACCCTCATTTCGGACGAGCGGAGGC
CGTTCGACGAGATCTCCGAGCTGAACGAGGGCCTGATGGGGAACCGCTCC
ATGTACTACTATGTGGGAGCCAGGCTCTTTCCGAATGTAAAGGGCTGTGG
CTACCCGCCAATGCTCAACTGTACCATCTGGCTAAAGAGGTACACCAAGA
TCGGCATGAAGTTCCCCTGCTACTACTCCAAGGTGGACCCAAGTCTGGTC
ATCAGCGACCTGGACTACTGGCAGAACACCCTAAACTTGGTCTACTCGAT
GGCCATTCCAATACCCTCGTTCATCATCTCGGTGATTTATCTGACGTATG
CCTACTTCAAGATATACAACGAGGATGAGAGACGCGCCGTTGACAAGAAC
GCGAAGACATGACATCGATGATATCGATGCGTGACGACAGCGATGTGCAG
TCTGCGACATGTGCGTAGCAAATCATAACATGACTCACCACACGACAGTG
TCTTGGAGGGTCTTGCTACGCGTTCCGGCATGACGC
UFO06893.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tipE-RB | 3938 | CG1232-RB | 1045..2120 | 7..1061 | 4830 | 97.9 | Plus |
| tipE-RA | 3396 | CG1232-RA | 1191..2266 | 7..1061 | 4830 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4190590..4191568 | 7..980 | 4645 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:18:45 has no hits.
UFO06893.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:38 Download gff for
UFO06893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tipE-RB | 1014..2032 | 7..1013 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:42 Download gff for
UFO06893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tipE-RA | 1191..2209 | 7..1013 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:56 Download gff for
UFO06893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tipE-RA | 1191..2209 | 7..1013 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:56 Download gff for
UFO06893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4190590..4191608 | 7..1013 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:42 Download gff for
UFO06893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4190590..4191608 | 7..1013 | 98 | | Plus |
