UFO06902.5prime Sequence
1099 bp (945 high quality bases) assembled on 2009-08-31
> UFO06902.5prime
CAGTCGACATGTTTTGTTCAGCTCTACGTAACATTTTGAGGAATTCACAA
AATGCGGCTAAAAACGCAACAATTACCTCACAAATACGAAATCTGCGAGG
ACAACAAAGTGTCCACCATGAGGTAGAAGTGTTAACATCACCGGGTATAA
CCACCAAACAGAATGACAAGAAGACCGAGCCTGCGGAATGTGAAGGCTCC
AAAGAAGTGGCTCTGGACTTCCGAAATCGGGAGGCCCATGTGCCTTCCTT
CAATTTGGCGGCCTATGTGAACAACTCGAGTACCCTGCAGCAATTTCTCA
GCTTGGGAGTGGATCTGCACAGTATTGAACGGCGAAAGGGATTGGGAGAC
TTTGTACTGAAGCTGGATTTCGAGAAAAATGTGAAGCCCTACATAACGTT
CCTGGTGGATCAGGGCGTATCACCCGATGACTTCGGCAGGATGTTCACCA
AGAACCCGCTGCTGTTCAAGGAGGACTTGGACGATCTGCAGACCAGAGTG
AACTATCTAAAAAGCAAGAGATTCTCGGACGAAGCCAGGCAAAGAATTCT
CACCCAGAATCCTTATTGGCTGATGTTCTCCACCAGGCGAGTGGATCGTC
GATTGGGTTACTTCCAAAAGGAGTTCAAATTGAGTGGTCATGATCTGCGA
CTGTTGGCCACCAGAGAACCCAATGCCATTACCTACAATATGGAACACCT
CCGCAAGTCTGTGTTCACCCTTAAGGAGGAAATGGGATTCAATGCCAAGG
AGCTAAGTGACCTGGTGGTACGAAAGCCGCGCCTCTTGATGATCCTCCGG
ATGATCTTGTCGAGCGATTAGTTACATTCACATGATATGGGCCTTCACAT
GCCAGATGTCAGTGCCGGAGCTTTGCTCAGCGATTAGCTGCGGACGCTGA
GTCTGATGCTGAACGCATATGATCGCAAAGACTGATTTCGCAAACTAATG
AGCATACTTATCGCGATGGGTAAAGATGAACTGATTGTTGACGAGCACTT
TAGACTGTGCTCGGACGTATGCATCACTATACGACGGTGCAGATGGTAAT
AGTGATCGATAAGCGGCCAGTCGAATCTAAGTTCAGCTAGATCAGGCGA
UFO06902.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mTerf3-RA | 1124 | CG5047-RA | 32..906 | 8..874 | 4160 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20519956..20520741 | 793..8 | 3930 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:27:08 has no hits.
UFO06902.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:28 Download gff for
UFO06902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mTerf3-RA | 2..878 | 7..874 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:18 Download gff for
UFO06902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mTerf3-RA | 25..906 | 1..874 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:22 Download gff for
UFO06902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mTerf3-RA | 25..906 | 1..874 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:22 Download gff for
UFO06902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20519954..20520744 | 1..794 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:18 Download gff for
UFO06902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20513054..20513844 | 1..794 | 99 | | Minus |
