UFO06909.5prime Sequence
979 bp (815 high quality bases) assembled on 2009-08-31
> UFO06909.5prime
CAGTCGACATGGCATCCACGTCGTCGTCGGCTTCCACGACGGCGGGATCC
TCCGGCGCGGCAGGCGGAGGAGCAGCCACGCCCATCTCAACGCCCTCGAC
GCCCCAGCCGTCTGGCGTGAGCAGCGGACCCGGCAATAATGGCAACAACA
ACAACAACCATCACAACAACACCCTGGTCTCACCATCCGGGAACAACAAC
TTGATGACGCCCGTCCAGGCATTCACTCCAACCGGACAGCCAGTGTACAA
TCCACCCGTCTATATGTCCGCCCACGGAGGACACCCGCACGCCGGAGCCC
ACTACCCGGCCATGATCCCCGCTCCGATGCCCAGCAATCACGTCTATGTG
AACAACGTCACTGCCAATGTGAACCTGCATGGCTGGCCGCACGGTGTTCC
GGCTTATATGCCACCCGGAGGTCAGCATCACTACATTGGACACGGCGACA
TGCCCCAGGAGCAGGGCAACACGGTGATGCCGCACCTGCAGCCTGTGCCC
ATTAATTTGGCGCCCCAGGGCGGATCTCCGAATCCCCATGGACCTAGAAT
GGGTGGCGGACGGATGCGCGAACGAGGTCGTCCCCGTGGCGGTGGACCGC
GACGCAATGACTACCATGGGCCACGTCACCCTCCAGCAGCAGCAACTGAT
CACCCTTCCGCCGCATCAAGCAACTGCCACCGCCGGACGGAGCCCAATCC
CGGGCTGCAGCTTCAGACGGATCAGATTGATCAAGCAGTTGGTGCCGCAA
GATGCGCACATGCAGCACATACAACAGGACTATCCGGCGCCACCATAACT
ACGCCTACGAGCCATATGCCTCTCCCTACTTCAACCCCACCATGCGAATG
TCTCAGCCTCCCCCCAATTGCCATTGCTGCCTAACAGGTAACTGGAACGA
CAGCCTCTTCATCACTGGACCGGATGAATGTATATTCCTGCCGTGCCTCA
GCACGGTGGATTCTCTATACCCCAATAAT
UFO06909.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32479-RC | 7873 | CG32479-RC | 181..1104 | 8..941 | 3970 | 95.8 | Plus |
CG32479-RA | 6346 | CG32479-RA | 447..1370 | 8..941 | 3970 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 873419..873876 | 8..465 | 2290 | 100 | Plus |
3L | 28110227 | 3L | 873988..874419 | 462..899 | 1465 | 93.2 | Plus |
Blast to na_te.dros performed 2014-11-28 19:51:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G2 | 3102 | G2 G2 3102bp | 436..476 | 47..86 | 112 | 78 | Plus |
UFO06909.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:47 Download gff for
UFO06909.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32479-RA | 437..1353 | 1..927 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:58 Download gff for
UFO06909.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32479-RA | 441..1357 | 1..927 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:07 Download gff for
UFO06909.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32479-RA | 441..1357 | 1..927 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:07 Download gff for
UFO06909.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 873413..873875 | 1..464 | 99 | -> | Plus |
3L | 873991..874444 | 465..927 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:58 Download gff for
UFO06909.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 873413..873875 | 1..464 | 99 | -> | Plus |
arm_3L | 873991..874444 | 465..927 | 92 | | Plus |