Clone UFO06909 Report

Search the DGRC for UFO06909

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:69
Well:9
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32479-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO06909.5prime Sequence

979 bp (815 high quality bases) assembled on 2009-08-31

> UFO06909.5prime
CAGTCGACATGGCATCCACGTCGTCGTCGGCTTCCACGACGGCGGGATCC
TCCGGCGCGGCAGGCGGAGGAGCAGCCACGCCCATCTCAACGCCCTCGAC
GCCCCAGCCGTCTGGCGTGAGCAGCGGACCCGGCAATAATGGCAACAACA
ACAACAACCATCACAACAACACCCTGGTCTCACCATCCGGGAACAACAAC
TTGATGACGCCCGTCCAGGCATTCACTCCAACCGGACAGCCAGTGTACAA
TCCACCCGTCTATATGTCCGCCCACGGAGGACACCCGCACGCCGGAGCCC
ACTACCCGGCCATGATCCCCGCTCCGATGCCCAGCAATCACGTCTATGTG
AACAACGTCACTGCCAATGTGAACCTGCATGGCTGGCCGCACGGTGTTCC
GGCTTATATGCCACCCGGAGGTCAGCATCACTACATTGGACACGGCGACA
TGCCCCAGGAGCAGGGCAACACGGTGATGCCGCACCTGCAGCCTGTGCCC
ATTAATTTGGCGCCCCAGGGCGGATCTCCGAATCCCCATGGACCTAGAAT
GGGTGGCGGACGGATGCGCGAACGAGGTCGTCCCCGTGGCGGTGGACCGC
GACGCAATGACTACCATGGGCCACGTCACCCTCCAGCAGCAGCAACTGAT
CACCCTTCCGCCGCATCAAGCAACTGCCACCGCCGGACGGAGCCCAATCC
CGGGCTGCAGCTTCAGACGGATCAGATTGATCAAGCAGTTGGTGCCGCAA
GATGCGCACATGCAGCACATACAACAGGACTATCCGGCGCCACCATAACT
ACGCCTACGAGCCATATGCCTCTCCCTACTTCAACCCCACCATGCGAATG
TCTCAGCCTCCCCCCAATTGCCATTGCTGCCTAACAGGTAACTGGAACGA
CAGCCTCTTCATCACTGGACCGGATGAATGTATATTCCTGCCGTGCCTCA
GCACGGTGGATTCTCTATACCCCAATAAT

UFO06909.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG32479-RC 7873 CG32479-RC 181..1104 8..941 3970 95.8 Plus
CG32479-RA 6346 CG32479-RA 447..1370 8..941 3970 95.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 873419..873876 8..465 2290 100 Plus
3L 28110227 3L 873988..874419 462..899 1465 93.2 Plus
Blast to na_te.dros performed 2014-11-28 19:51:15
Subject Length Description Subject Range Query Range Score Percent Strand
G2 3102 G2 G2 3102bp 436..476 47..86 112 78 Plus

UFO06909.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:47 Download gff for UFO06909.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32479-RA 437..1353 1..927 95   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:58 Download gff for UFO06909.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32479-RA 441..1357 1..927 95   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:07 Download gff for UFO06909.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32479-RA 441..1357 1..927 95   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:07 Download gff for UFO06909.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 873413..873875 1..464 99 -> Plus
3L 873991..874444 465..927 92   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:58 Download gff for UFO06909.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 873413..873875 1..464 99 -> Plus
arm_3L 873991..874444 465..927 92   Plus