UFO06910.5prime Sequence
1075 bp (987 high quality bases) assembled on 2009-08-31
> UFO06910.5prime
CAGTCGACATGGAAGCGTGGAAACAGCTGCCAAACGGAGGGCGTTTCCTG
CTGCTTCTCCTGGCCTGCATCGCCCACCTGGGCCACCCAATCCTCGCCTG
GCGCCCCTGTCCGGAGCTCAGTCCCGCCCTCCGTCTGCCATGCAGGTGCA
ATGTGGTTCCGTTTGCGGCGACTGGCCAACTGGGAGCCGTGGCCATGGAC
TGCGATCGCGTTGTCTTCCACGGCGATGCCCCGCAACTGCCTTATGGAGC
GCCCATCGTGGCGTATACACAACGTCACAGCGGCCAACAGGTGCTGCCCG
CCCAGACTTTTGGTCAACTCAAACTGACCATTGAGGAGCTGGATCTGTCC
TACAATCTCATCCGAAGGATACCGGAGAAGGCATTCGATGGCCTCAAGGA
TTCGCTGAACGAACTGCGACTGGCGAACAATTTGTTGGGCGACAATCTGA
ATCCCATCTTCTCCACCGCCGAACTGCATGTGCTGAAGAACCTGCGTCTC
CTGGATTTGTCCGGAAACAAGATCAAGCTGATCGAGGAGGGTCTTCTCAA
GGGGTGTATGGATCTGAAGGAGTTCTACATCGATCGCAATAGCCTGACAT
CGGTGCCCACCAACTCTCTGAATGGCCCAAGTGCCCTGAGACACCTGTCG
CTGCGCCAGAACCAGATTGGATCACTCCTTGCGGACTCATTCAATGCCCA
GCGGCAGCTGGAGATTATCGATCTTCGCCACAATGTCATCCGCAGCATCG
ACAGTCTGGCCTTCAAGGGACTGCAGAAGATTCGGGAGATCAAGCTGGCC
GGGAATCGGATCAGTCACCTCAACAGCGACGTCTTCGAGAAGCTGCAGTC
TCTGCAAAAACTGGATCTGTCCGAGAACTTCTTCGGTCAGTTTCCCACGG
TGGCACTGGCCGCGGTTCCCGGATTGAAGCACCTTAATCTGTCCTCGAAT
ATGCTACAGCATTGGACTACACCCCACATGCAGTGTAGAGCTGAAAGCTT
GGACATCAGTCCGCACACTAACACCATTACACCCAGGACTTCAGGGAATG
GGGCTCTGAGTATCTGACCTCAGCT
UFO06910.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7896-RA | 4955 | CG7896-RA | 525..1610 | 4..1075 | 4960 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29986310..29986677 | 303..670 | 1840 | 100 | Plus |
| 3R | 32079331 | 3R | 29986889..29987179 | 669..959 | 1455 | 100 | Plus |
| 3R | 32079331 | 3R | 29985914..29986076 | 143..305 | 815 | 100 | Plus |
| 3R | 32079331 | 3R | 29985594..29985737 | 5..148 | 720 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:18:52 has no hits.
UFO06910.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:35 Download gff for
UFO06910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7896-RA | 496..1558 | 1..1052 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:52 Download gff for
UFO06910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7896-RA | 522..1584 | 1..1052 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:56:59 Download gff for
UFO06910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7896-RA | 522..1584 | 1..1052 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:56:59 Download gff for
UFO06910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29985591..29985734 | 1..145 | 99 | -> | Plus |
| 3R | 29985917..29986076 | 146..305 | 100 | -> | Plus |
| 3R | 29986313..29986676 | 306..669 | 100 | -> | Plus |
| 3R | 29986890..29987179 | 670..959 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:52 Download gff for
UFO06910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25811313..25811456 | 1..145 | 99 | -> | Plus |
| arm_3R | 25811639..25811798 | 146..305 | 100 | -> | Plus |
| arm_3R | 25812035..25812398 | 306..669 | 100 | -> | Plus |
| arm_3R | 25812612..25812901 | 670..959 | 100 | -> | Plus |
