UFO06917.5prime Sequence
1128 bp (997 high quality bases) assembled on 2009-08-31
> UFO06917.5prime
CAGTCGACATGGAGAACGGAGTGGAACATGGTGTGGACGAGTCAGGCGAG
AACCAGGTGCTGAGCAGTTCCGATGGCGAGGGAGACTGTGATGGTGACGG
TGAAGTGGAGGGGGAGGTGCTGCAGCCGCCGCCGCCGCCGCCACTGCAAA
TAACAAACGATTGTGTTGGCGAAGGGGTGCAAGCGGAGGAGGGGGAGCGT
GCACCAGCGACGACCGGAGCTGTGGACGTCACTCCGGACCCTGGGCCACC
GCCCACGGATGGTGCAGCACCTGTAGCCATACTGGAGGACAACATGTGCG
ACAAGGATGTGGATAGCGATGCTGGCGACGAGGACAACGACGATGAGACC
AAGGAGAACTACGAGGGCTTCAATGGCACCGGACGCACCGTCACACTGCA
AACGCTGATGGCTGCCAATGTCCTGCAGCCGGGCCTGGGCTTAATGACTA
TCGAATATCTGGGCCAGAAGTTCGTTGGCGATCTACTGGCCGACGGTAAG
ATCAAATCCCATGAGACTGAGACAATATTCCTCACGCCCAGCGCCTGGGC
AATGCACTGCAAGCGGATCATCAATCCGGACAAGAAGAGCGGCTGCGGCT
GGGCCTCGGTCAAGTACAAGGGAAAGAAGCTGGACGCCTACAAGAACACG
TATTTGCGAAAGTGCGCGTTGCAAAAGGAGACGCCGCTAGATGATTGTGA
ACTGGATGCTGAACGCAAGACTGACACCCCGGAGATTGTCGTCAAGCGAA
CCGTTTTCGCACATAATACCGTTTCGAATCGCAACGTAGTACACGACGCC
AACATGTTGATTGAATCGGTGCCGTTTACTTCGGTGGGGAAATTGCAGCC
CTTCCTCATTACAGTGAACTCCTCTGCCCTCTTGCTGGCGGATTTTCACT
GCCACTTGACAGTGCGTGAGGTGTGCGGCTATCTAGTGGCACCTGGGACA
TGAACACACACACTCTATCCATCACAAAGACATATTCCTTGTCGCAGCCC
GCCGCTTGATCGACAGCGAGCCGGCGAAGTGGAAGCGTGATATTCAAAAG
ATGATGATTCAGATCAATTGCTGGTGGGTGGATGGATCACTCGCATCCAA
GTTTCAGGCGGACTACGTGCCGACTGCG
UFO06917.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4751-RA | 4883 | CG4751-RA | 128..1254 | 8..1128 | 5300 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11131262..11131621 | 346..705 | 1800 | 100 | Plus |
| 2L | 23513712 | 2L | 11130864..11131203 | 8..347 | 1700 | 100 | Plus |
| 2L | 23513712 | 2L | 11131887..11132056 | 794..962 | 785 | 98.8 | Plus |
| 2L | 23513712 | 2L | 11131674..11131762 | 705..793 | 445 | 100 | Plus |
| 2L | 23513712 | 2L | 11132122..11132272 | 963..1112 | 425 | 92.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:05:02 has no hits.
UFO06917.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:30 Download gff for
UFO06917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4751-RA | 116..1250 | 1..1128 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:39 Download gff for
UFO06917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4751-RA | 120..1254 | 1..1128 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:42 Download gff for
UFO06917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4751-RA | 120..1254 | 1..1128 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:42 Download gff for
UFO06917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11132122..11132292 | 963..1128 | 91 | | Plus |
| 2L | 11131887..11132056 | 794..962 | 98 | -> | Plus |
| 2L | 11130856..11131203 | 1..347 | 98 | -> | Plus |
| 2L | 11131264..11131621 | 348..705 | 100 | -> | Plus |
| 2L | 11131675..11131762 | 706..793 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:39 Download gff for
UFO06917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11130856..11131203 | 1..347 | 98 | -> | Plus |
| arm_2L | 11131264..11131621 | 348..705 | 100 | -> | Plus |
| arm_2L | 11131675..11131762 | 706..793 | 100 | -> | Plus |
| arm_2L | 11131887..11132056 | 794..962 | 98 | -> | Plus |
| arm_2L | 11132122..11132292 | 963..1128 | 91 | | Plus |
