UFO06924.5prime Sequence
1101 bp (1004 high quality bases) assembled on 2009-08-31
> UFO06924.5prime
CAGTCGACATGGCCTATCGGAAGCCCAGCGACCTGGATGGCTTTATCCAG
CAAATGCCCAAGGCGGACATGCGTGTGAAGGTACAGCTCGCCGAGGATCT
GGTGACATTCCTTAGCGACGACACAAACTCAATTGTCTGCACGGACATGG
GATTCCTTATTGACGGTTTGATGCCATGGCTGACGGGCAGCCACTTTAAG
ATTGCACAAAAGTCCCTGGAGGCGTTCTCGGAGCTAATAAAGCGATTGGG
CAGCGATTTTAATGCATACACGGCTACCGTTCTGCCACATGTGATCGATC
GGCTGGGAGACAGCAGGGACACAGTCCGCGAGAAGGCGCAACTTCTGCTG
CGCGACCTCATGGAGCACAGAGTGCTTCCGCCCCAGGCGCTGATCGACAA
GCTGGCCACTAGCTGCTTCAAGCACAAGAACGCCAAGGTGCGCGAGGAGT
TCCTTCAGACGATTGTGAACGCTCTTCATGAGTACGGCACCCAGCAGCTT
AGTGTTCGCGTCTATATACCACCAGTTTGTGCACTTCTCGGAGATCCCAC
AGTTAATGTGAGGGAGGCGGCCATCCAAACGCTAGTGGAAATCTACAAGC
ATGTAGGGGATCGATTGCGCCCAGACCTCCGTCGCATGGACGATGTTCCT
GCCTCGAAATTGGCTATGTTGGAGCAAAAGTTCGACCAGGTCAAACAGGA
GGGTCTACTGCTACCTTCAGCCCTTAAAAACACGAATGGCAATGGAGTGG
GCTTGGACGAGGCCGACAATATTGGGTTGAGGGAGCGACCCACCAGGATG
ATTAAGCGGCCACTACACTCGGCCGTTTCGTCATCACTGCGCCCAAAACC
CAATGTGAACGATGTGACCGGTGATGCCGGCGCCGTAACCATGGAATCTT
TCGAATCTAGCTTTGAGGTGGTCCCGCAATTGAACATCTCCACGCTGAGA
CATGACGATATCTACAGCAGTACTAGTGATCATCAGTGATAAAAACGCAG
ACTGGGAGAAACGTGTGATGCTTCTCAAGAAGAATCAGGCATTGCCTCAT
TCTCAGCTATCACCCTCAGCGGCAGTGGTCGCTTACAGCTTAAGAAGTTG
G
UFO06924.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chb-RC | 5264 | CG32435-RC | 119..1210 | 9..1094 | 5100 | 98.4 | Plus |
| chb-RA | 5930 | CG32435-RA | 785..1876 | 9..1094 | 5100 | 98.4 | Plus |
| chb-RB | 5375 | CG32435-RB | 230..1321 | 9..1094 | 5100 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21178133..21179204 | 9..1076 | 4890 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:30:03 has no hits.
UFO06924.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:25 Download gff for
UFO06924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chb-RC | 109..1210 | 1..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:10 Download gff for
UFO06924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chb-RB | 220..1321 | 1..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:45 Download gff for
UFO06924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chb-RB | 220..1321 | 1..1094 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:45 Download gff for
UFO06924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21178123..21179224 | 1..1094 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:10 Download gff for
UFO06924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21171223..21172324 | 1..1094 | 98 | | Plus |
