UFO06928.5prime Sequence
1109 bp (1005 high quality bases) assembled on 2009-08-31
> UFO06928.5prime
CAGTCGACATGCGCAAATCGCCGGCCAGCCTGCCGTCGGAGGCCTTCTCC
AGTTCGAACTCCTCGCTGAGCAACTCGTACAGCGATGGCAGCGACCTGGC
CAACTGGGAGGAGTACGTGTCCACAGACGGCAGTCTCTTCTACATGGAGT
ATGTGCGATGTGAGAAGACTGGCGTCTCGGCAGAGCGGCGGGTGGAGTTC
ATGCGTCGATCGCTGCGCCTGGGAAAGAAGTCGTCGCGTCGCCAGCCGCA
CAGCAATAATCAGAATCAGAGTCAGAACCAAAACCAGTCCCACGGCCCGA
GCAGGTTGGATAGCCAGACGGAGCCGCAAGAGTTCCGCTTCTCACAGTTC
AAGACGGCTGCCCCCGATCCCAAGAAACTGGATCTGGTGATCACAGCCGC
TGATCGCTTCCGTTTCGGACGACGATCCACGGCGGTGGAGTCCATACTGG
GCTTCCGGGTCCTGCCCTTTCCGGACCAACCAGAATGCCTGATGGTCGAT
GGGTTCGTTCACGATGTGAGTGCGCTGCAGCACGGCATCAAGCGGGGAGA
TTGGTTTAGATCCCTGAATGGCATAGAGGTGTACGCCAGCAATGTGGATG
AGTTGCTCAAGCAGTTCGTGGAGCCCACTCAGGTGTGCCTAGGCTTCCAG
TCGTGCGGTGCGGCCAGTGCAGTTTCGCCCACCGATCCGGGGTATAATCG
AAATGTCCGCGAGGAGCACGTGTGCAAGGTGGAGAACTTTCCCATGTTCA
CGGAGAAGTTTGAGCAGATGTTGATAACGGAGGGGAACTTCGGTATTCCC
GGTAGTTCCGTGGACATAAGAATGCCCTTTGCTATGCTGCTACTCCCACC
GGAGTGCTATCAGCATGAACAGCAACAGATTCCCTCTACTACTTTCCGGA
AATCCCCGACACTTCCTATTCAAGGCCCGTGGGGAGTTTCCTCACCCTGC
ACGCCGTACTCAGTGAACTGCACACCCAGCCGCTGAAGTCAAGCTGCTTG
GTGATCAGTGCAATACCACGTCACTACGCCACTGAATGGGTTCCTAGTCC
TCTTCCCCCTACGCCGAGATCTGCTTGTCGCGATGCAGCTGGCAATCGGA
TGACCTATC
UFO06928.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| in-RA | 3062 | CG16993-RA | 119..1181 | 9..1066 | 4995 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20367316..20368368 | 9..1055 | 4785 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:04:25 has no hits.
UFO06928.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:23 Download gff for
UFO06928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| in-RA | 108..1191 | 1..1075 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:41 Download gff for
UFO06928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| in-RA | 110..1193 | 1..1075 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:43 Download gff for
UFO06928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| in-RA | 110..1193 | 1..1075 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:43 Download gff for
UFO06928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20367307..20368390 | 1..1075 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:41 Download gff for
UFO06928.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20360407..20361490 | 1..1075 | 97 | | Plus |
