UFO06930.5prime Sequence
1139 bp (997 high quality bases) assembled on 2009-08-31
> UFO06930.5prime
CAGTCGACATGGCGTTACTCTACCGACGCATGTCGATGCTATTAAATATA
ATTCTTGCATATATTTTCCTTTGTGCGATATGTGTGCAAGGATCTGTGAA
ACAAGAGTGGGCAGAAATAGGTAAAAACGTATCTCTAGAGTGCGCATCTG
AAAACGAAGCAGTAGCATGGAAGCTGGGCAACCAAACTATTAATAAAAAC
CATACAAGATATAAAATAAGAACTGAGCCATTGAAATCCAACGACGATGG
CAGTGAAAACAACGATAGTCAAGACTTCATCAAGTATAAGAATGTCCTGG
CGCTTCTCGATGTCAATATAAAGGACTCGGGGAACTACACATGCACAGCC
CAAACGGGGCAAAACCATTCGACTGAATTCCAAGTTAGGCCATACCTTCC
ATCCAAAGTCCTGCAAAGTACCCCCGATAGGATTAAGAGAAAAATCAAGC
AGGATGTCATGTTGTACTGTTTGATCGAGATGTACCCACAAAATGAGACA
ACTAATAGAAACCTCAAGTGGCTTAAGGACGGCAGCCAGTTTGAATTCCT
GGACACCTTCTCGTCCATTTCGAAGCTAAACGATACGCACTTAAACTTCA
CCCTGGAATTCACAGAAGTTTACAAGAAAGAGAATGGCACCTACAAGTGC
ACCGTCTTCGATGACACCGGACTCGAAATTACCTCCAAAGAGATTACCCT
TTTCGTAATGGAAGTGCCACAAGTTAGCATTGATTTCGCCAAGGCAGTTG
GTGCTAATAAAATATACCTAAATTGGACCGTTAACGACGGCAACGATCCA
ATTCAGAAGTTCTTCATCACTCTGCACGAGGCTGGAACACCGACTTTTAC
TTATCATAAGACTTTATTAACGGCAGCCATACATCGTATATTCTGGACCA
TTTCAAGCCGAACACAACCTATTTTTTAAGATCGTGGGAAAGACTCGATT
GTCAATGGCCAACCCACCCAGTATCCCCAGGAATCACCACGCTTAGTTAT
GATCCATATTTATACCAAAAGTCGAGAACACCGGCAGCACGGCGTCACGA
ATAACGATGGCTGGATTCCACCGCCGCCGAATCTCCATTGATTATATACA
TACTCGACTGATTGTCCGATCGCAGGGTCTAATGGATCG
UFO06930.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp69D-RB | 5165 | CG10975-RB | 208..1324 | 8..1116 | 5205 | 98.4 | Plus |
| Ptp69D-RA | 5168 | CG10975-RA | 208..1324 | 8..1116 | 5205 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12736251..12737149 | 207..1100 | 4000 | 98.1 | Plus |
| 3L | 28110227 | 3L | 12736056..12736160 | 104..208 | 525 | 100 | Plus |
| 3L | 28110227 | 3L | 12735152..12735249 | 8..105 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:03:12 has no hits.
UFO06930.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:58 Download gff for
UFO06930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RB | 199..1320 | 1..1116 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:14 Download gff for
UFO06930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RA | 203..1324 | 1..1116 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:21 Download gff for
UFO06930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RA | 203..1324 | 1..1116 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:21 Download gff for
UFO06930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12735147..12735249 | 1..105 | 96 | -> | Plus |
| 3L | 12736058..12736160 | 106..208 | 100 | -> | Plus |
| 3L | 12736253..12737168 | 209..1116 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:14 Download gff for
UFO06930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12728247..12728349 | 1..105 | 96 | -> | Plus |
| arm_3L | 12729158..12729260 | 106..208 | 100 | -> | Plus |
| arm_3L | 12729353..12730268 | 209..1116 | 98 | | Plus |
