UFO06931.5prime Sequence
1110 bp (1008 high quality bases) assembled on 2009-08-31
> UFO06931.5prime
CAGTCGACATGATAACTGCTAAGAAGCACCCGCTGGACAATTGCCAATTG
TTTGTCCAGCTGAAGAAGTTATTTCATGACTACAACGAGAAGGTCCAGCG
TCTGAAGGACATGATTTACTGGAGTGGAAACGATGAGCACATTGCGAAGA
TCTGCGACCAAGTGACGGACCTGCTGGTGGAGCACGATCTAATCATACAG
CCGCCAGACACAATGGATCCTTGTGCTATGAATCACCTGCGTGGACTACT
GGTGTACCTGGTGCTGAACACTGCACACGATGATATCCAGTGCGAATCGC
AGTGGAGCGCCAATGTCATGCATTTGTGTAACCAGCTGCCGCCTATCCCA
CTGTTCTTGACCATCGCAATAGCCGTTAACTGCTGTCTCATGGAGCCGCT
GGAGGAATTCCTTGCTTGTGGACCCCGCTGGCTGACCATCCAGTATTTTG
AGGCATTCAATGAGGCTCTGTCGGTCATTAATTCAGATTGCGTGGAAACA
CTACCGCTGCTCTCTGCCGCCCTCAGAGCAGCCGGTCGCGCAATTGTCAA
CTGCAATTTGCCCGCAGAAAATAAGCAACTGCTGCGCCAGATAGCCTGCA
TGGAACATCGTCATATCTTGGACTCTAAACAGCGCCTCCATACGCTGCCG
CGTCCATCCACTCGAAAGATTTACCTGGCCAAGGCTATGGATCACCTTAT
AGAAGTCCTTTTGTATACCCTCAATGATCCATTAAAGCGGGAGAAACCAA
ATTGCTTCGCCGTCTACAGCCAAATAACCGAGGACATCAGTGACAGCAAC
TCAAGCGATCCCATGCCTGATCTGCGGCATTTCGCCCAAATACTGCTAGA
CGTTCTGCAGCGTATCTTTCAGCTCGTTAGCGTAGACACGTATATGTATT
GGCATGAAATGAAATCGAAAAGTGCTTTGTATAACTGCCAGGAGCTAATC
TGTAGACAGACGGCGGATTGCTTAAAGTACTCAATCAGATAAGTTGCTCG
GAAAACATCCGTTTGCAAGCAGATGCAGAGCTTGCGGATGCAGCAAAAAC
ATTGGAGCACCCGGTTGCCGAGAATAGAAATCGTGACTCTTGGCGTTATC
GATTCCGATG
UFO06931.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2941-RB | 3954 | CG2941-RB | 306..1410 | 9..1107 | 5195 | 98.5 | Plus |
| CG2941-RA | 3378 | CG2941-RA | 306..1410 | 9..1107 | 5195 | 98.5 | Plus |
| CG32786-RB | 3307 | CG32786-RB | 214..1318 | 9..1107 | 4790 | 95.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3936992..3937943 | 126..1073 | 4470 | 98.9 | Plus |
| X | 23542271 | X | 3941230..3942181 | 126..1073 | 4290 | 97.7 | Plus |
| X | 23542271 | X | 3945426..3946377 | 126..1073 | 4245 | 97.4 | Plus |
| X | 23542271 | X | 3936822..3936940 | 9..127 | 595 | 100 | Plus |
| X | 23542271 | X | 3941060..3941178 | 9..127 | 400 | 89.1 | Plus |
| X | 23542271 | X | 3945256..3945374 | 9..127 | 400 | 89.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:18:06 has no hits.
UFO06931.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:57 Download gff for
UFO06931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2941-RA | 296..1408 | 1..1110 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:18 Download gff for
UFO06931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2941-RA | 296..1408 | 1..1110 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:36 Download gff for
UFO06931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2941-RA | 299..1411 | 1..1110 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:36 Download gff for
UFO06931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3936815..3936939 | 1..126 | 97 | -> | Plus |
| X | 3936993..3937980 | 127..1110 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:18 Download gff for
UFO06931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3830848..3830972 | 1..126 | 97 | -> | Plus |
| arm_X | 3831026..3832013 | 127..1110 | 98 | | Plus |
