UFO06937.5prime Sequence
1032 bp (959 high quality bases) assembled on 2009-08-31
> UFO06937.5prime
CAGTCGACATGAAGGCTTTTACATCCATTGCCCTGCTCGTGTGCCTGGCT
GCCTGGACCCATGCGGAACCACCAGTTCCCCAGAACCAGTACCTGCCCCC
CAATCAGTCGCCTCAGGCGCCGTCCAACAACTACCTGCCGCCCACGCAGG
GCTACCAGTCGCCGTCGAGCAACTACTTGCCACCCCAGCGGGCCGGTGGC
AATGGAGGAGCGCCCAGCAACAGCTATGGCGCCCCCATCGCTCCTCCCCA
GGGTCAATATGGTGCTCCAGCGCTGACTGGTGCCATCTTCAAGGGCGGAA
ACGGAAACGGAAACGGCGGCTATGGCGGCGGTAATGGCAACGGCAACGGC
TACGGACAACGGGATGAGGAGCAGTATGGACCGGCCAAGTACGAGTTCAA
GTACGACGTACAGGACTACGAGTCGGGCAATGACTTCGGCCACATGGAGT
CCCGCGATGGTGATCTTGCTGTGGGCCGCTACTACGTCCTGCTGCCCGAT
GGACGCAAACAGATTGTTGAGTACGAGGCCGACCAGAATGGATACCGCCC
AACCATTCGGTACGAGCAGGTCGGCAATGGCAACGGAAACGGCAATGGCA
ATGGTCGCAACGGTGGCGGTTATGATAGCAACGCGCAGCAGGGCAAATTC
AACGGCTACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGGCGGCAACCGAGCGTTCTGACAAATCCAGATGGAGTTCTGAGTCATTA
CTGGATCTATCACAGAGTCCAGCGAGCTCGATATCAATTACGCCCGCCCT
GCACTCATCGCAGTACTGTGTATCATAGCATCTGCGACATGAGCATCACA
AACGCATGATGACTGATCGCAGCGCATCAGCACCTGTCGCTGGTTATATT
GGCCATGTGAACGAGCCAGACTGTCATTGTCC
UFO06937.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr56F-RA | 1259 | CG9036-RA | 113..763 | 9..659 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20288867..20289513 | 659..13 | 3235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:29:16 has no hits.
UFO06937.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:52 Download gff for
UFO06937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr56F-RA | 105..765 | 1..664 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:39 Download gff for
UFO06937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr56F-RA | 107..767 | 1..664 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:08 Download gff for
UFO06937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr56F-RA | 107..767 | 1..664 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:08 Download gff for
UFO06937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20288863..20289513 | 13..664 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:39 Download gff for
UFO06937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16176368..16177018 | 13..664 | 99 | | Minus |
