UFO06941.5prime Sequence
1095 bp (973 high quality bases) assembled on 2009-08-31
> UFO06941.5prime
CAGTCGACATGGAGACTTGTGAAGTGGAGGGAGAGGCGGAGACGCTGGTG
AGACGCTTCTCCGTCAGCTGCGAGCAATTGGAGCTGGAAGCGAGAATTCA
GCAAAGCGCTCTGTCCACCTACCATCGCTTGGATGCGGTCAACGGGCTGT
CCACCAGCGAGGCAGATGCCCAGGAGTGGCTGTGTTGCGCCGTCTACAGC
GAACTGCAGCGCTCGAAGATGCGCGATATTAGGGAGTCCATCAACGAGGC
AAACGATTCGGTGGCCAAGAACTGCTGCTGGAACGTGTCACTAACCCGTC
TGCTGCGCAGCTTTAAGATGAACGTGTCCCAGTTTCTACGCCGCATGGAG
CACTGGAATTGGCTGACCCAAAACGAGAACACTTTCCAGCTGGAGGTTGA
GGAACTGCGTTGTCGACTTGGTATTACTTCGACGCTGCTGCGGCATTATA
AGCACATCTTTCGGAGCCTGTTCGTTCACCCCGGCAAGGGTGCGGACCCG
GGTGCCGCGAATCACTACCAAGCGCTGTATGAGTTCGGTTGGTTGCTCTT
CCTGGTCATTCGCAACGAGTTACCCGGTTTTGCGATTACAAACCTGATCA
ACGGCTGTCAGGTGCTCGTTTGCACAATGGATCTCCTTTTCGTGAACGCC
TTAGAGGTGCCCCGATCCGTAGTTATCCGCCGGGAGTTCTCTGGAGTGCC
CAAGAATTGGGACACCGAAGACTTCAATCCTATTTTGCTAAATAAATATA
GCGTGCTAGAAGCACTGGGAGAACTGATTCCCGAGCTACCAGCGAAAGGG
AGTGGTGCAAATGAAGAACGCCTTTTTCCACAAAGCCTTAATAATGCTCT
ATATGGACCATAGTCTAGTTGGAGACGACACCCATATGCGGGAGATCATT
AAGGGGGTATGCTAGATATCAATCTGGAAAACTTAATCGCAAATACACCA
TCAGTAGCGACATTATTGAGATGGACGAGCGTGTGCTGCTCACGTCAGGG
CGATAGAGAACAAAGGAACTCTCTAAGCCACAGCTCGCTCAACAGCCGTA
CTCGCTAGGACCGTCACATGATCTACAGCAGCTTCTAGCATAAAG
UFO06941.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rbf2-RA | 2693 | CG5083-RA | 161..1203 | 9..1038 | 4820 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15965606..15966593 | 9..992 | 4635 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:30:03 has no hits.
UFO06941.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:48 Download gff for
UFO06941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rbf2-RA | 156..1183 | 9..1026 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:55 Download gff for
UFO06941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rbf2-RA | 156..1183 | 9..1026 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:40 Download gff for
UFO06941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rbf2-RA | 161..1188 | 9..1026 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:40 Download gff for
UFO06941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15965606..15966633 | 9..1026 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:55 Download gff for
UFO06941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11791328..11792355 | 9..1026 | 98 | | Plus |
