UFO06944.5prime Sequence
1078 bp (992 high quality bases) assembled on 2009-08-31
> UFO06944.5prime
CAGTCGACATGGCAGCCACATTGAAGCCCTACCTGACCGCCGTGCGACAC
TCGCTGACGGCGGCGATGTGCCTGCAGGACTTCCCCTCGCAGGTGGTGGA
GCGGCACAACAAGCCGGAGGTGGAGATCTGTTCCAGCAAGGAGCTGGTGC
TCACGCCCGTCGTCGTGTCGCGCAACGAGCGGGAGAAGGTGCTGATCGAG
CCGTCCATTAACTCGGTGCGCGTGAGCATCGCCGTGAAGCAGGCCGACGA
GATTGAGCGCATACTGTGCCACAAGTTCACCAGGTTCATGATGCGACGCG
CCGAGTCGTTCGTCATACTGCGCCGCAAGCCCATCGAGGGCTACGACATA
AGCTTCCTCATCACCAACTTCCACACGGAGCAGATGTATAAGCACAAACT
GGTGGACTTTGTCATTAGCTTCATGGAGGAGATCGACAAGGAGATCAGCG
AAATGAAACTGGCGGTCAATGCCAGGGCACGCACCTGCGCCGAGGAGTTC
CTCAAACGGTTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCA
GGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGC
CTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAAC
GCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGT
CATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTAC
GCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCT
GCCGACATGGAAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGC
GGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAAACG
GGGCGAGAGTTGTCCATATTGGCCACGTTAATCAAACTGTGAACTCACCC
AGGATTGCTGAAACGAAAAACATATTCTCATAACCTTAGGAAATAGCAGG
TTTCACGTACCGCCCATCTGCGATATATGTGTAGACTGCGAATCGTCTGA
TCACTCGAGCATGAAACGTCGTTGTCAT
UFO06944.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arpc4-RA | 712 | CG5972-RA | 118..621 | 9..512 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6125249..6125752 | 9..512 | 2520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:29:29 has no hits.
UFO06944.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:45 Download gff for
UFO06944.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arc-p20-RA | 104..615 | 1..512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:42 Download gff for
UFO06944.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arpc4-RA | 110..621 | 1..512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:20 Download gff for
UFO06944.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arpc4-RA | 110..621 | 1..512 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:20 Download gff for
UFO06944.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6125241..6125752 | 1..512 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:42 Download gff for
UFO06944.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6125241..6125752 | 1..512 | 99 | == | Plus |
