UFO06960.5prime Sequence
1070 bp (981 high quality bases) assembled on 2009-08-31
> UFO06960.5prime
CAGTCGACATGGTTTGTTGTGCAAGCAATCTGAAGCTCAAGGAGCTGAGC
AGCCTGAATAGCAGCATCTATGTGGCCTCCGGCGGATCGGCAAGTCGCTC
CCAGAAGCGTTTGTACAGCAGTCGCAACAGCAGCGGAGTGGGCAGCAGCA
GCAGCGGTAGCAGCAGCGGTAGCAGCAGCTCCTCATCGTCCAGTCGCAGC
ATCTGGAGCCGCTCCAGCCAGCCGATTTGCGATGATTTCGCAGAGCAACC
ACAACTGGACAAATCCTGCGGTTACTACACCTGCAGCAGCGCCAATTCAT
CGCCGAGAAAGGGCCAGGAGAATGACGAGGAGATGGAGGGAGTGCTTATG
CGCACGCAGGACATGAGTGCATCATCCCGAGACTCTACACAATCCGATCA
AATGGTGGGCAATCTGGAGTGGGAGATGCACATGATGCAGCAGGCGCAGC
GCATTATGCCCAAGACCTCGTCGCCGATTTGCCAAAGAAGGGATAATGCT
CAGATGCCTCCCTCATCGTACCAGAAGTGGAGAAACTATCTGCAATCCAC
GCCAGCGCACATGCTGCACAATGTCACCCACATTCCGGAGGCAATTGCCG
GCCACTTTTGCCCCACCAGCTTTCCGGGCTTCAGCGACCTGGAGGAGATG
GAGAGTGCGGCCAAGAGGTTCAAGGTGGATTTCGAGAAGAACCACTGGAG
GAGCCCATGTACACCACCTACCAATTGCTAGCCGGGCACACGCACACCAT
ATCCACAGATCTGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGAGATCCTGGTCATGACTAGTGCTTGATTCTCACAATAAAAACGCC
CGGCGGCAACCGAGCGTTCTGAACAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCACAGAGTCAGCGAGCTCGATATCAATTACGCCCCGCCC
TGCCACTCATCGCCAGTACTTGTTTGTATCATAGCCATTCTGCGAATGAA
GCCACTCACAACGCATGATG
UFO06960.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14427-RA | 1167 | CG14427-RA | 87..843 | 8..763 | 3745 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7040689..7041445 | 8..763 | 3720 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:43:37 has no hits.
UFO06960.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:28 Download gff for
UFO06960.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-RA | 82..844 | 8..769 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:04 Download gff for
UFO06960.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-RA | 87..849 | 8..769 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:58 Download gff for
UFO06960.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14427-RA | 87..849 | 8..769 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:58 Download gff for
UFO06960.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7040689..7041451 | 8..769 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:04 Download gff for
UFO06960.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6934722..6935484 | 8..769 | 99 | == | Plus |
