UFO06966.5prime Sequence
1089 bp (991 high quality bases) assembled on 2009-08-31
> UFO06966.5prime
CAGTCGACATGTACAGTAGCAGCTTGCTGCCGGATCCGGCTGTCTATCAG
CCGGACACCCTGGACCTGAACACGGATGGAAAGGCGGCGGATTACTGGTT
CAACTGCTTCCGCGACATGGTGGCCAAGTTCGCGAAGGTGGCGGCCAAGT
CACAGGAGGAGGATCACACGGCCACCCAGCGGGCGGAGCAGTTCCAGGCG
GCGTATCTGCAGCGGCTGGAGGAGCACCAGCGTAATGTGCCAGTCAACAA
GGGCAAGGTGATTCTAGGCACCAGTGAGCTTCTCAAGCTAAACGAAACCC
TGTTGCGCCGCTACGGATTTACAGATCCCTGGCTGAGACAAAAGAGGCTG
GAAAATGCATCGGCTGTTGCCCGCCTGAAGCAGCGTCTGCAGGAATTGGA
TGCCCTGGCGGATGAGGACACAAGGTGGACGGAGCTGGTACGCGGTGTCC
TCGCCGGCAACATGTTTGACTGGGGCGCACAGGCCATATCTAACATACTG
GAGCAGGACAGCAATTTCGGACTTCATTCAGCCCTGGATCGCATTGAGAA
GCGACCCTGGTTGCTTGACAACCTGGACAGCTGGTTGAATCGCCTCAAGG
GCGAGCCACACAAGTGCGCCGTGGTCTTTGTGGACAACAGCGGCGTGGAT
GTGGTTCTGGGTGTGCTTCCCTTTGTCCGTGGACTGCTGAAACGTGGCAC
CAAGGTGCTGCTCTGCGCCAACAGTGAACCTGCTCTAAATGATGTGACCA
GCGAGGAGCTGAAATCCTTGCTGGACGACTGCTCGCGCGAGTGTGAGGTC
CTGGAGCAGCCTGGTCAAAGGGACAACTACTGGTCTATGCAAATGGACAG
ACTGGTCCCTGCCTGGATATGCGCACTCTCCCCAAGGAGCTGTGCGACGC
CATCGCCGCCATGAGACTGACTGCTTGTGATTGAGGGCATGGGACGCGCC
CTGCACACAAATCTGAATGCCCGCTTCGCTGCAGACCCTCAGTGGCGTGA
TAAAAAAACAATGCTGCAGTACTGGGCGGCAGGAAATGTTCGCCGTCGTC
TGCAAGTCGACGGCTGCCCCAGCAGCTTCTAACATCGTT
UFO06966.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5828-RB | 1935 | CG5828-RB | 131..1213 | 9..1073 | 4940 | 98.1 | Plus |
| CG5828-RA | 1428 | CG5828-RA | 95..1177 | 9..1073 | 4940 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5094106..5095078 | 9..978 | 4715 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:02:42 has no hits.
UFO06966.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:23 Download gff for
UFO06966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5828-RA | 79..1168 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:35 Download gff for
UFO06966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5828-RA | 88..1177 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:46 Download gff for
UFO06966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5828-RA | 88..1177 | 1..1073 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:46 Download gff for
UFO06966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5094099..5095188 | 1..1073 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:35 Download gff for
UFO06966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5094099..5095188 | 1..1073 | 97 | | Plus |
