UFO06967.5prime Sequence
1115 bp (1017 high quality bases) assembled on 2009-08-31
> UFO06967.5prime
CAGTCGACATGTTCAAGTTGCTGGTGCTCTCGTGCCTTTTGGCTTTGGCT
CTACCTTCGCTGGCGGAGGTTGGCTGGTGGAAGACGGGTCAGTTCTACCA
GATCTATCCCAGATCTTTTAAGGATAGCGATGGCGACGGCGTGGGAGATC
TCATAGGTATTACGCAACAGCTGCCTTACCTAAAGGAAATTGGCATCACA
GCCACCTGGCTTTCCCCGATCTTCACCTCACCCATGGCTGATTTCGGCTA
CGATGTGGCTGATCTTAAGGGTATTGATCCCATATTCGGCACAATGGAGG
ATTTCGAGGCCCTGCTTGCGCGCGCCAAAGAGCTGGACATCAAAATCATT
CTGGACTTTGTGCCCAACCACACCAGTGACGAGTGCGACTGGTTCATACG
ATCGGCAGCTGGCGAGGAGGAGTACAAGGATTTCTATGTTTGGCACACCG
GCAAGGTGGTCAACGGAATCCGCCAGCCACCCACCAACTGGGTCTCCGTG
TTCCGCGGATCCATGTGGACCTGGAACGAGCAACGGCAGGCGTACTACCT
CCACCAATTCCACGCCAAACAGCCCGATCTAAACTACCGCAACCCCAAGG
TTGTTGAAGCCATGAAGGATGTACTGCGCTTCTGGCTGCGAAAGGGGGCT
TACGGCTTCCGCATCGACGCCGTTCCTCATGTCTACGAAATTCCAGCTGA
TGCCGACGGCAACTGGCCCGATGAACCGCGGAACGAGGCGGTGAGCGATC
CCGAGGACTACACTTACCTGCAGCACATCTACACCACCGATCAACCCGAG
ACCCTGGAGCTGGTTTACGCTTTCCGCGATGTGATCGAGGAAATAGACGC
CGAGCTGGGTGGCGACGACCGCGTCCTGCTCACCGAGGCCTACTCTCCTC
TGGAAGTTTTGATGCAGTACTATGGAAATGGCACTCACTGGGCTCCAGAT
CCCCTTCAATTTCGAGCTGCTGGCAAGATCAGCTACAGCTCCGATGCTAC
ATTACTCGGGAGCTGATCCCAACTGGCTGACAAATGCAGAAGGTCAGGGT
GCCTAACTGTGTCGCAACACGAACCAAAGTCGCATTGGTCCGATGGGGCC
GATCCACTCGAACCT
UFO06967.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mal-A3-RA | 1795 | CG8695-RA | 36..1127 | 8..1088 | 5030 | 98.3 | Plus |
Mal-A5-RC | 1988 | CG30359-RC | 240..592 | 93..445 | 430 | 75.1 | Plus |
Mal-A5-RA | 2045 | CG30359-RA | 240..592 | 93..445 | 430 | 75.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8456803..8457649 | 997..154 | 4085 | 99.6 | Minus |
2R | 25286936 | 2R | 8457707..8457857 | 158..8 | 755 | 100 | Minus |
2R | 25286936 | 2R | 8463133..8463401 | 177..445 | 340 | 75.1 | Plus |
2R | 25286936 | 2R | 8459103..8459264 | 285..446 | 300 | 79 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:47:43 has no hits.
UFO06967.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:22 Download gff for
UFO06967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LvpL-RA | 25..1090 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:56 Download gff for
UFO06967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mal-A3-RA | 32..1097 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:33 Download gff for
UFO06967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mal-A3-RA | 32..1097 | 1..1062 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:33 Download gff for
UFO06967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8456697..8457646 | 157..1093 | 97 | <- | Minus |
2R | 8457709..8457860 | 1..156 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:56 Download gff for
UFO06967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4344202..4345151 | 157..1093 | 97 | <- | Minus |
arm_2R | 4345214..4345365 | 1..156 | 97 | | Minus |