UFO06970.5prime Sequence
1071 bp (955 high quality bases) assembled on 2009-08-31
> UFO06970.5prime
CAGTCGACATGAAATCGCTCGTTGTGTGCTCTTTGATCGGATTGGTCCTG
CTTATGGCCGCTGGCCAAGTTCGTGCCGAGTGCGACGAGGCCAAGAGTCC
CGAGGACAGCGAATTCAAGCACTTCTTCAAGAACCTAGGCTGCAAGGTCA
ACCAGGGGGCCAAGGAGGTGGCCGAGGCCGCCAAGCCCTACACCGACAAG
ATCGGCGAGGGCGCCAAGGAGTTTGGCAGCTCGGTGGCCCAGAAGTACGA
CGAACTGAAGCACAAGCTGACCGATGAGCCATCGACCACGCCCAAAATTC
CAGTGGCCTATGACGCCCCCACCGAGAAGGTCCTTTTAGCCCCCATCGGA
GGACCCAGCACCCCGATCCCAGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCA
ATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAG
TTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATA
TCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATT
AAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAA
TCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATG
GTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAA
ACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAACATATTCTCAAT
AAACCCTTTAGGAAATAGCCAGGTTTTCACCGTAACACGCCACATCTTGC
GAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATCACTCCAGAGCG
ATGAAAACGTTTCAGTTGCTCATGGAAACGGTGTAACAAGGGTGAACACT
ATCCATATCACCAGCTCACCGTCTTCATGCTACGAAATTCGATGACATCT
CAGCGGGGCAGAAATGTGATA
UFO06970.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9691-RA | 534 | CG9691-RA | 61..423 | 9..371 | 1815 | 100 | Plus |
| CG9691-RB | 603 | CG9691-RB | 61..423 | 9..371 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9884502..9884864 | 9..371 | 1815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:24:04 has no hits.
UFO06970.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:18 Download gff for
UFO06970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9691-RB | 54..423 | 1..371 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:26 Download gff for
UFO06970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9691-RB | 54..423 | 1..371 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:00 Download gff for
UFO06970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9691-RB | 54..423 | 1..371 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:00 Download gff for
UFO06970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9884495..9884864 | 1..371 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:26 Download gff for
UFO06970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9778528..9778897 | 1..371 | 98 | == | Plus |
