UFO06978.5prime Sequence
1102 bp (1000 high quality bases) assembled on 2009-08-31
> UFO06978.5prime
CAGTCGACATGGATACGACAGAAAAGGCTCTCAAGGAGGTGACCCCGGCG
ATGCTTAGCCTGAACAATTGCCCGGGCACAACGCCCGGCACGCCGATGAG
CAAAAATCAGCTTAAGAAGCAGCGAAAGCTGGCGGAGTTTGCCGAACTCC
GGAAGCTGCGACGCGAACGGGAGCGTGAGAAGAAAAAGCAGAAGCGGCGG
GAGGCCAAGGAGCTGGGTCTGCCCGTCCGGACGGGACCCTCCCGCAAGGA
GCTGAAGAAACGCCAGTTGGCAGACGGCGGAAAGTCTGGCCTCTCGGTCG
CTATAGATCTGGACTACGACGATCTGATGCAGGAACGGGACATCGTCAAG
TGCGTGAAGCAGTGCCTTCGCATCTACACCATTAATCGGCGCAGCCCACA
GCCGGGCAATCTGCACTTCACAGGCATCCGGCGCAACGGTCACATCCACG
AGTCATTCAAGAAGAACGAAGGCTGGGAGAACTGGCACGTGCAGTACTAC
TTCGATCGCGGGCACACCGATATTTTCGAGCATAGCCAACTGGTCTACCT
CACCTGCGAGTCGGATCGGGTGTTGGACAAGCTGCAGCCCGGCTGCACCT
ACGTCATCGGTGGCCTGGTGGACCACAATCACTTCAAGGGCCTGTGCCAC
TCGAGGGCCACGTCGGCGGGGCTGACTACCGCTCGCCTCCCGCTTAGCGA
GCATGTAGACATGAAGACGAGGGCCGTGCTGAGCACCTACCATGTGTTTG
AGCTGCTGACCAAAGTTGCTGCCGGTCAGGACTGGACTACGGCCATTCTG
GAAACTATTCCCATGCGCAAGGAGCCAAGGCGAAAATCACAGACAAAAAG
GAGCCGAATCATTGCTTGAGCAGCAGATGAAAAACAGAAACAGGAGCTGA
GTCAGATAGCCCACCTTAACCGCCGTCGAGTCTGAAATCGAATCCCATTC
TTTAGACAGTGCAAGCTTTCTAGACATCGTTTGGCGCGGCGGGCCCAGGT
AGTGTCATAATCATATCATATCATATCATATCACACTAGCCTAAGGAGAT
CTGTCATGACTAGTGCTGATTCCCACAATAAAACGCCGGCGCACGAGGTC
GA
UFO06978.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14618-RA | 1210 | CG14618-RA | 113..1069 | 9..960 | 4660 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22473810..22474545 | 9..744 | 3680 | 100 | Plus |
| X | 23542271 | X | 22474636..22474857 | 744..960 | 860 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:05:31 has no hits.
UFO06978.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:56 Download gff for
UFO06978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14618-RA | 73..1037 | 1..960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:20 Download gff for
UFO06978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14618-RA | 105..1069 | 1..960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:24 Download gff for
UFO06978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14618-RA | 105..1069 | 1..960 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:24 Download gff for
UFO06978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22473802..22474545 | 1..744 | 99 | -> | Plus |
| X | 22474637..22474855 | 745..958 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:20 Download gff for
UFO06978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21875638..21876381 | 1..744 | 99 | -> | Plus |
| arm_X | 21876473..21876691 | 745..958 | 97 | -> | Plus |
