UFO06979.5prime Sequence
1095 bp (988 high quality bases) assembled on 2009-08-31
> UFO06979.5prime
CAGTCGACATGAAGTGCCTGATTCTGTCCTTTGCAATTTTCGTTGTCCTG
GCTTCCCAGGCTACGGCCGGAAATGTGATTATCGGCGGAGTATGCCAGGA
TTGCAGTCCGCCGGTGGCGGAAAACGTCGTAGTCGGTGGCCAATCCTACA
GGACGGGTAGGCCGGGCCAGGGAACGGTGTATATCAATTCCCCTGGCGCA
TATCTAGGAGCTCTCGATGGTCCCATTCGGCGAACTGGCGCTGGCGGCGG
AGGAGGCGGTGGCGCCCAGTATCCGGATGGTTACAGTGGTCGTCTGCCAG
GTGGCACTTACCTTCACAATAAGGATTGCGTGGGCTGCAGCATCAGCGGG
GGCGGGGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCAT
TACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCC
CCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCC
GACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCA
TCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGG
GCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACT
CACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAG
GAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGT
GTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACG
TTTCAGTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATA
TCAACCAGCCTCACCGTCTTTTATGGCATACAAATCGGATGACATCATCA
GGCGGGCAGAAGGATAAGCGATAACTTGGCTATTTTCTACGCTGA
UFO06979.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
IM23-RA | 468 | CG15066-RA | 33..383 | 9..359 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18382789..18383082 | 359..66 | 1470 | 100 | Minus |
2R | 25286936 | 2R | 18383146..18383203 | 66..9 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:18 has no hits.
UFO06979.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:56 Download gff for
UFO06979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
IM23-RA | 20..383 | 1..363 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:33 Download gff for
UFO06979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
IM23-RA | 23..386 | 1..363 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:31 Download gff for
UFO06979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
IM23-RA | 23..386 | 1..363 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:31 Download gff for
UFO06979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18382789..18383081 | 67..359 | 100 | <- | Minus |
2R | 18383146..18383213 | 1..66 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:33 Download gff for
UFO06979.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14270294..14270586 | 67..359 | 100 | <- | Minus |
arm_2R | 14270651..14270718 | 1..66 | 94 | | Minus |