UFO06982.5prime Sequence
1140 bp (1018 high quality bases) assembled on 2009-08-31
> UFO06982.5prime
CAGTCGACATGAATGTAGGCAAGATAAGCGTTGTCACCAGACTTCCTGCC
CTCCGCTCGTGCGCCCAGTACTCGAGCGCTGCGAAAGCGGAACTGCCGGC
TTCCTTGGTCGGCGACGTGGATGTGGAACCAACATATCCCCAGACGGTGG
ACAGATCCGGCCTGCAACCACAACACAAAAATGTGCTCCTTAACAAATTG
CCATACCAGGAACCTCACTCCTGGATTCATTTGACCGAGAAGTACCAGAG
ACAGGCATTCGGCCGGTATGGGGCCCAGAGCAATGTGAATCCCAAGATTT
GCTTCGATTCCCACGGAGAGAAAGACAGCAGGCAGGTTATGCAACTAGAA
ACACTCCTGAAAATGCTGGAGAAGAACCGCGCGCAGAAGGCAGAGGAGCT
GGCAAGGATAAATGCCCGTGAAGAGGACATTGCGAAGAAGATGGAGAAGT
TGACACAGTGGAAGGCGGACCTGCACGCGAAGATCGCTAAGCGGGAGGCG
GATGCAGCGGCAGCCATACAACGCAAGGAACGCCTGGTAGAGGAGGTGCG
CCGACACTTCGGGTTCAAGGTGGATACACGCGACGAACGCTTTAAGGAAA
TGCTAGAGCAAAAAGAGAAGGAGGACAAGAAGAAGCAGAAGGAGGCCAAG
CGAAAGGCCAAGGAGGAGAAGATGATGGCCAAGCTGGTAGAGAAAGCATC
AGTGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAATTACGCCCGCCCT
GCACTCATCGCAGTACTGTTGTAATCATTAGCATTCTGCGACATGGAAGC
CATCACAACGGCATGATGAACCTGATCGCAGCGGCAATCAGCACTTGTCG
CCTGGCGTATAAATATTTGCCCATGTGAACCGGGGCAAAAAGTTGTCCAT
TTGGCCGGTTAAATCAAAACCTGGGGTGAACTTACCCAAG
UFO06982.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7172-RA | 840 | CG7172-RA | 66..761 | 9..704 | 3480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21568138..21568833 | 704..9 | 3480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:05:21 has no hits.
UFO06982.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:54 Download gff for
UFO06982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7172-RA | 71..783 | 1..713 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:14 Download gff for
UFO06982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7172-RA | 57..769 | 1..713 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:17 Download gff for
UFO06982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7172-RA | 57..769 | 1..713 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:17 Download gff for
UFO06982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21568130..21568840 | 1..713 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:14 Download gff for
UFO06982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21561230..21561940 | 1..713 | 98 | | Minus |
