UFO06984.5prime Sequence
1051 bp (966 high quality bases) assembled on 2009-08-31
> UFO06984.5prime
CAGTCGACATGGGAACCGGCAGCAAGAACTACCAGGCTCCGGAATGGCTC
ACCGCCGAATTCCTGCAGGATGTGCTGAAGGAACACTTCAAGGAAGAGCA
GCTGGCAGTCACCGAGTTGATAGTAAAGAGCGCCCAAGTGGGCGACCAGG
CGGCGGGATTTGCCAGCGAAATGCATCGGGCCAGTTTCAATCTTCAGAGG
GGCACTGCACCCAAAGGCAAGTTTTCAGTGATTGTGAAGGATCATCCCAA
GGGACAAACAGGTGCTGTGGCCCACAGGAGTAAGCTCTTCAAGCGTGAGA
TTCTGGCTTACAAGGAGGTGCTTCCACGTATTCAAGCCTTGCTCCAATCC
ATTGGAGATCAAACGAAAATTGCACCTACGTGCTACTACACCACGGAATC
GCCGGAGCCATTCCTGATTCTGGAGGACATGCAGCTGTCCGGCTTCGAGA
ACTTCGAACGCGGTCGACTGCTGAATCTGGACTACGTACTGCCCACCATC
GAGAAGGTCGCCAAGCTGCACGCTTGCAGCGCCCTTATCGCCCAGGATAG
CCCCGAGGTGCTGGAGTTCTTCGACGAGGCGCCCATTTCGAGGAATCCGG
ACCGTCGTGACTTCCTCACCTTCTTCCCCGTCAACATTCGCTGCGTGGCC
GAGGAAGTGGCTCACTGGAAGGGCTACGAGGAGATCACCGAGAAGATGTT
CAACCTGGCCGAGAATGTCCTGCAAAGAGCGCTGACCATGTTTGAGAGCA
CAGGCAAGGATTTCCGGGTCTTCAACCTCACCGATCTGTGGATCAACAAT
CTCTTGTTCCACATCAACAACGAGACCAAGAGCCAGACGATGTGGTCACA
TTGGACTTTCAGTTGGCCTATGTGGGATCCCCAACCATTGATCTCAATTA
CTTCCTCTACGATCCTTGAACGAAGAATGTCGTAAGTCCACTATAGTACA
TTGTGAGGAATAACAGAGAGTGCTTCAGCGACCTGGAGAGCTAACTACAG
ACCATCCACTCTTAAGAATCCACTCAGTGATCAGACAGCTATGGGTGTCA
T
UFO06984.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31098-RA | 1487 | CG31098-RA | 108..1101 | 9..994 | 4710 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25292028..25292870 | 850..9 | 4165 | 99.9 | Minus |
| 3R | 32079331 | 3R | 25291832..25291964 | 979..851 | 375 | 92.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:34:52 has no hits.
UFO06984.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:52 Download gff for
UFO06984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31098-RA | 102..1077 | 9..979 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:25 Download gff for
UFO06984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31098-RA | 108..1083 | 9..979 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:18 Download gff for
UFO06984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31098-RA | 108..1083 | 9..979 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:18 Download gff for
UFO06984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25292028..25292870 | 9..850 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:25 Download gff for
UFO06984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21117750..21118592 | 9..850 | 99 | | Minus |
