UFO06986.5prime Sequence
1112 bp (989 high quality bases) assembled on 2009-08-31
> UFO06986.5prime
CAGTCGACATGGCCCACTACAAAGGTGCCGCCAGCGAGGCGGGCCGTGCA
GCCCAGCTGATGAAGAAGCGGGAGATCCAGCAGCAGGAGATCGAGTTTCG
CAAGAAGAAGATCGAGGAGGAGCTCAAGCTGGACAAGATTGAGAACAAGT
TTGCCACCCACTACGATGCCGTGGAGCAGCAGCTCAAGTCCTCGACCATT
GGTCTGGTCACCCTCGACGAGATGAAGGCCAAGCAGGAGGATATAGTGCG
GGAACGGGAGAAGAAGCTCGCCCAGAAGAAGGACGAAAAGGATCGGGAGA
AGCAGCGCGCCCTGGAGGCCATTCAGGCGGAGAAGAACAAGCAGAAGCGG
CAGATCCAGGCGCTGTCCTTCAACCTGGACGACGACGAGGAGGAGGAGGA
GGAGGACGACGAGGATCACGATAAGAAACAGCTGAAGATTAAGCAGGAGG
ATCAGCCCAAGCCCAAGTGGACGGAGATCAAGGAAGACATTTTGCCCATA
AAGAAGAAGAAGATATGCAAGAATCCTGACGTGGACACTTCCTTTCTGCC
AGATCGCGAGCGCGAGGAGCAGGAGAACAGACTGCGCGAGCAGCTGCGTC
AAGAATGGGTAATGCAGCAGGCGGAGCTGAAGGACGAGGACATCTCCATC
ACGTTCAGCTACTGGGATGGCTCCGGCCATCGGCGGAACGTGCTGATGAA
GAAAGGGCAACTCCATCTACCAGTTTCTGCAGAAGTGCCTGGAGCTGCTG
CGCAAGGAGTTCATCGAACTGAAGACCGTAATGGCCGACCAGCTGATGTA
CGTCAAGGAGGATCTGATCCTGCCGCACCACTATTCCTTCTACGACTTTA
TCGTGACCAAGGCACGCGGCAAATCCGGCCCGCTCTTCCAGTTCGACGTC
CACGACGATGTGCGCATGATAGCGACGCCTCCGTGGAGAAGGAGGAGTCC
CATGCCGGAAAGGTACTCCTTCCGCTCTGGTACGAGCGCAACAGGCACAT
CTTCCCAGCCAGCGGATGGGAGCCCTACGATCCCACAAGTCTTACGACAG
TACACCATCAAGACAGATAAGAGTAAAGCAGCCTTCTAGACATTCGTTGG
CGCCGGGCAGGT
UFO06986.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12259-RA | 1246 | CG12259-RA | 96..1169 | 9..1077 | 5120 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27919939..27920994 | 1062..9 | 4965 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:51:26 has no hits.
UFO06986.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:50 Download gff for
UFO06986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12259-RA | 75..1154 | 2..1081 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:05 Download gff for
UFO06986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12259-RA | 93..1172 | 2..1081 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:12 Download gff for
UFO06986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12259-RA | 93..1172 | 2..1081 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:12 Download gff for
UFO06986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27919918..27920997 | 2..1081 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:05 Download gff for
UFO06986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23745640..23746719 | 2..1081 | 98 | | Minus |
