UFO06987.5prime Sequence
1122 bp (1013 high quality bases) assembled on 2009-08-31
> UFO06987.5prime
CAGTCGACATGGCAGATAAAAAGGTGGGTGGCAACAATGACGGTAAGGAG
AAGCGCCGCAAGGAGTCCATTCTGGACCTCTCCAAGTACTTGGAGAAACA
GATCCGCGTGAAATTCGCGGGCGGCCGCGAGGCATCCGGAATCCTCAAGG
GCTACGATGCGCTGCTCAATCTGGTGCTGGACAACACGGTGGAGTATCTG
CGCGACTCGGATGAGCCCTACAAACTGACCGAGGAGCAGACCCGCAGCCT
GGGACTGGTCGTCTGTCGCGGCACAGCCCTCGTCCTCATTTGTCCGCAAG
ACGGAGTCGAGAGCATCGCCAATCCGTTTATAACGCAAGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTG
AACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAAC
GGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCG
TATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTG
GCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGAC
GAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCAC
CGTAACACGCCACATCTTGCGAATATATGTGTAGAACTGCCGGAATCGTC
GTGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAACG
GTGTAACAAGGGTGAACACTATCCATATCACCAGCTCACCGTCTTTCATG
CATACGAAATTCCGGATGAGCATTCATCAAGGCGGGCAGAATGTGAATAA
AGGCGGATAAACTTGTGCTATTTTTCTTTACGTCTTTAAAGGCGTAATCA
ACTGACGCTGTTAAGTACTTGG
UFO06987.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| LSm7-RB | 466 | CG13277-RB | 41..370 | 9..338 | 1650 | 100 | Plus |
| LSm7-RC | 544 | CG13277-RC | 41..370 | 9..338 | 1650 | 100 | Plus |
| LSm7-RA | 705 | CG13277-RA | 41..370 | 9..338 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16742672..16742988 | 338..22 | 1585 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:06:25 has no hits.
UFO06987.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:49 Download gff for
UFO06987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13277-RA | 23..359 | 1..338 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:04 Download gff for
UFO06987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LSm7-RA | 34..370 | 1..338 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:26 Download gff for
UFO06987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LSm7-RA | 34..370 | 1..338 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:54:26 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:39:04 has no hits.
