UFO06993.5prime Sequence
1079 bp (966 high quality bases) assembled on 2009-08-31
> UFO06993.5prime
CAGTCGACATGAGCCGACAATTTATGCATTTACCGCTTCACAGCCGGCTG
CGCCGTTTGAGAAGCGGATTGGAACCGCCATCCGGCAATGTCGTGGATGA
CAGAATGTGCTGGATTTGCCTGAGGGGCGATGAGGATCACCGCCGAAGGG
ATTGGGTGCATCCGTGTCGCTGTCGCGGCACCAATAAATGGGTGCACGAG
GCCTGTCTGAGTCGCTGGATCGATGAGAAGGAGATGCTATCGCCGGGTGC
TCCCGTGACGTGCACCCAATGCCGCACGGAGTACATTATAGTGATGCCGC
CACTATGCCGCTTCGATGCCATGCTGGAGCGACTGGACAAGGGCTGCGAT
CGTATGTGTCCCAGTGTTCTGATGGGCATCCTGGCGGCCACCGTTTACTT
CTCCGCGGTGATCTACGGAGCACTCACCGTGCTCCAACTGGCCGGCTATA
GCACGGGCATGAAGCTGCTCCAAGAGGATCCCTCGCTGCTGATGATTGTG
CTGCCATCGGTGCCGACGCTCCTACTTCTCAGCAGGCTTGTGCGCTGGGA
GGACTGCGTGATCCGTTGGCTGCGTCGGCGCAAACGTAGCGCCATTCCCG
CCGAGCAACTGGATGCTGTGGGTCTACCCCTGCCCGGTGCTCCGCTGAGC
GATGAGTACTTCGATGAGCTGGAGCGCGAGTATCCGGCCTCGGATGGCCT
AATTGGCGGTAACTTGGCAACGGAGCAACTTGGTCGCGCCTCCACCAGCT
TCTGCATTGCCCTAAGTCTGCCCACCATTTCCGTGGTGCTGGGACAGAAG
CTCTTCGGCAGGATCTACGAGGAGAACAAGTTATTGAGCATCCTCCTGGG
CGGACTGACCTTTGTGACCATCAAGGATTGGCCAGTATCTTCCTTAGCCA
GTCGCAGTATCACAGAGCGCCCAGATTCGTCATGACTACACTCCTCGCAT
CGTATCACTATCAGTCCCGGGCAGCTTTCTAGAACATTCGTTTGGCGCGC
GGCCAGGTTAGTTGTCTAATCATATCATATTCATATCTAATCCACTAGCT
AGAGATTCTGACATGACTATGGCCTGGAT
UFO06993.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10761-RA | 1253 | CG10761-RA | 165..1133 | 9..970 | 4655 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8161660..8162628 | 970..9 | 4480 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:51:34 has no hits.
UFO06993.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:44 Download gff for
UFO06993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10761-RA | 158..1137 | 1..975 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:16:21 Download gff for
UFO06993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10761-RA | 158..1137 | 1..975 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:03 Download gff for
UFO06993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10761-RA | 158..1137 | 1..975 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:03 Download gff for
UFO06993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8161656..8162635 | 1..975 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:16:21 Download gff for
UFO06993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8055689..8056668 | 1..975 | 98 | | Minus |
