UFO07003.5prime Sequence
1145 bp (1030 high quality bases) assembled on 2009-09-15
> UFO07003.5prime
CAGTCGACATGCCTGCCTTTATGCACCTCCTTCGCAACTTCATTCCCAAG
TGGTGTCTCCCACGTCCAGAGAAGCATCTCCAGAACCACATATTCCGTCA
GCTCCAGACGAATCACCCATCCGCCGCACTGGTGGCCATCAAAACAAGTG
AACAGGTGCTGCCCAAGTGCAGATTCATGCAGTACCGGCGCGCCAATGAG
CAGGTGAAGCGATTGGGCATGGTCTCCGAGGATGGCAGCAAGATGGCGGA
GCTATCGAGCATGACCTGCGCCGCCCCCAATATGATGGACTTCATCCAGC
AGAGATACTGCATGGTTAGCCTGCTGGACAGTGTGCAATTCATGAAGATC
GAGGATGTGGAGGCCGTGGATCTCCGCCTGCTGCCACCCATCGATTCCCC
CAGTAAGATCATTGGCGTGGACTGCAACTATGTGGATAACTGTGATGAGC
AGCACATCTCGATTCCGAGGGAGCCGAGTTTTCACGTCAAGTTCGCCTCC
TCGATAACCGGAGCTCTGGACAACATACGGGCGCATAGTTCGGCCAAACA
CATTGACTATGGCTGCCAGTTGGCCGTGGTTATGGGCAAAAGATGCCGTG
AAGTTTCGCCCAAAGAGGCTCTGAATCACGTATTTGGATTCATGGTGGTC
CAGGACATCGTGGCAAGGGACTGGAATGTTCCGCTGGGCGGTCACTCAAT
GGATACTTTCCTCCCACTGGGACCTACAATTGTGCACAGGTGCCATGTGC
CAGACTTAAACAATCTGTGGATTAAGACAATCATCAATGGCGAGGAGCGC
CAGACGGGCAATACCCGTAATATGATATTCAAGATCGACTTCCTTATTCA
CCGCCTATCCCAATATTTAACTCTCTGTCCGGCGACATTATACTAACGGG
AACACCCGCCGGATCGGGTGCATTTCGTCATCCGTCGTGCTTTTTGAAGC
CCGTGATCTTATAGAGAGCGAATTCAAATTTGGGCAAATGTGCATAAGTC
GTTATTCTATTTCTGCAGCTTTCTAGACATCGTTGGCGCGCGGGACCAGT
AGTTGTCAATCATAATCATATCATATCATATCCAACTAGGCCTAGGAATC
TGTCATGACCTAGTGCTTGTATCACAATAAACGCTCAGGCGCAAC
UFO07003.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11251-RA | 1389 | CG11251-RA | 142..1144 | 9..1004 | 4840 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13088863..13089828 | 972..9 | 4730 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:29:26 has no hits.
UFO07003.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:39 Download gff for
UFO07003.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11251-RA | 142..1153 | 9..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:47 Download gff for
UFO07003.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11251-RA | 142..1153 | 9..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:14 Download gff for
UFO07003.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11251-RA | 142..1153 | 9..1011 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:14 Download gff for
UFO07003.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13088817..13089828 | 9..1011 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:47 Download gff for
UFO07003.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13081917..13082928 | 9..1011 | 99 | | Minus |
