UFO07006.5prime Sequence
1114 bp (1016 high quality bases) assembled on 2009-09-15
> UFO07006.5prime
CAGTCGACATGGGTCACCGCAACATTTGCTGCAACGGCTGTCAAATGACG
ATCTTCCAGGGTAGCCGCTTCCGGTGTTTGCGCTGCGTGAACTATAACCT
ATGTGACATATGCTACGATCATCAGATAGAAACGGAAGAGCATCGCGCCA
ATCATCCCATGCAATTGTTCCCTGACTCGGACGATCTGGTTCCGCTGCTT
TACGGCGAAATCCCAGAGCTGGTCCACCTGTCCAATTGCTTCACCTGTCC
ACATTGCGGCCTACTTGCGCTCACAGCGAAGCGGTTCATCGAACATGTTT
ACGTTCAACATCGGGTGTCCAATGAATATGTGGTCTGCCCCATGTGCGCC
GGACTGTCGGCCGCCGAACTGGTGGCCATACGCCACCTTTCCAAACATCT
CCTGCACAACCACATCGATCACGCCAATTACCTAGAGCCCGACACACCGC
CACTACGCCGAATATTTACCCGTAATCACATGCGCCACCACCGCCAATCG
CAGTTGCAAACAACTCCGAATTCAAGGATATTCGATATATCCGTATGGCT
GTCAACTGGACGTGTGAGCTCCGATCCCCAGCTCCTAAGCAACAATGATC
CTCCAGAGGAGGCAGCCAATTCAGAGTCCCTGGCGTTAGGCTTGAGTTCC
GGGGGGCCATTCGAACACGACGACGACAGATATGTTCTACTTCAGTGGAT
TGCACAGCAAAAAGTGCAGTGCCACGATACGGACGAATCTCAAAGGCTGC
GGCGAACCCTCTTCGTTGAGCACTTGCTGATTTCCATGCTGTGCTGCGAG
GAGTTGCAGTTGCCGGATGGAGACAGACGAATACGGGAAAGGAAATGGGG
AGAGTGATCTAGACCAGGAAAACCATAGCAGTCTGGTCAAGGTCATGTCA
GTGATGTCACTGCCGTGACAGGAGTTTGGCAGACCAACCAGCTAGACGGA
TCGGAGGGGGAAGGCGAGATACGGGCAGCAAAAAAGATGGAGTCGATCTG
GACAAGTGCAGATCGAGAGCACAAAGCTGCTGCTGAGGAGTCATGATGCA
GCCTTCTAGACATTCGTTTGGGCGCGCGGCCCAGTAGTGTCATATCTAAT
CTAATCTAATCTAA
UFO07006.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42585-RA | 1225 | CG42585-RA | 109..1146 | 9..1040 | 4990 | 99.1 | Plus |
| CG31835-RA | 1225 | CG31835-RA | 109..1146 | 9..1040 | 4990 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14735951..14736961 | 9..1017 | 4860 | 99.6 | Plus |
| 2L | 23513712 | 2L | 14740022..14741032 | 9..1017 | 4860 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:25:22 has no hits.
UFO07006.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:37 Download gff for
UFO07006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31835-RA | 101..1158 | 1..1051 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:46 Download gff for
UFO07006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42585-RA | 101..1158 | 1..1051 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:33 Download gff for
UFO07006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31835-RA | 101..1158 | 1..1051 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:33 Download gff for
UFO07006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14735943..14737000 | 1..1051 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:46 Download gff for
UFO07006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14735943..14737000 | 1..1051 | 98 | | Plus |
