UFO07007.5prime Sequence
1137 bp (1042 high quality bases) assembled on 2009-09-15
> UFO07007.5prime
CAGTCGACATGCTGTTGCCGGAGCTGCTGCTACTCGGCTTGGCCGTCTCC
CTGGCGGACAGCTACGACCGAAGCGTCAACTACTGGGAGGCCTTTGCGCC
CGGCAAGCTGCTCCAGCGCCTGGACGCTCTCACCGTCACGGATGTGGACC
AATCGAAGGTGGTCAAACTGCCGCAGTTGATGCAGCCCATCCTGCCAGCC
AACGAAGCGCAGGCCAAGGTGGATGAGGACGTGGACGTGGATGTTGAGAC
GGATGCAGAGGCGGCGGCCGTTGACGATGTGGACAGCCTTAGTGCGGAGA
CCAGCCACGAGGGCTACTCCGGCGAGGACAACTACGAGCGCAACTACGAG
CAGTTCGTCAAGGAGTACTTCGATCGGGCTGCCGACGACGATGACCACGA
CGAAGGCGAAGGCCTGGTGGAGGAGGAGGAGGAGGAGACCCAGGCGGAGG
CCACCAATGTCAGGGATCAGCGCTGCCGGCAGGTCAAACGGAAGGATGGC
CAGCTGTGCGAGATCTGTCGCCAGTTGAAGAACAACGAGGTGTCCGAAAC
GTGTAGCTACTCGCACGACGACCAACCGCAGCAGTACGCCTATGGCAGCG
GCAGCCAGTACAAGCGTTACCGCGACGATCCCGCACAGAAGGCGGATCAG
GAGCAGGCCGAGCCGGTGGCGCCCAGCAGCCTGTGCGTGCGCCGCCAGCA
GAAGAACAGCGTCTGCTACGAGTGCAAGGACAGCAAGGGCCAGAAGATCG
AACGCTGCTACGATGTGCAGGCCCGCAAGGCCAAGACCCGAAAGACGAAG
GCCTCCTCCACCCGTCATCCGTCCAGCTCCGTTCACAAACGTAAGCCGCG
TTCCCAGCAGTCGCAGCAGTCGGAGCAGGAGCAGCGCATCTACAGCGCAC
CATTAGCTACAGCTATGCCCAGGGCACGGATCAGCAAGGGGCCGCGGTCG
GAGCAGCCGGCGCGGGACACGGAGCTGCAGTGCACGCAGCGTCGCGGCGG
CTGGTGAAGATACGCGTCGGCGCGGACGGCTAAGGTGCAAGCAGCTTCTA
GAACATCGTTTGGCGCGCGGGCCAGGTATGGTCTAATCATATGTAATTCA
TATCTAATCACTAGGCCTAGGAGTCCTGTCTGACATT
UFO07007.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32537-RB | 1817 | CG32537-RB | 338..1378 | 9..1040 | 4900 | 98.7 | Plus |
| CG32537-RA | 2442 | CG32537-RA | 963..2003 | 9..1040 | 4900 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19273876..19274828 | 961..9 | 4655 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:59:08 has no hits.
UFO07007.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:34 Download gff for
UFO07007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32537-RA | 961..2003 | 5..1040 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:20 Download gff for
UFO07007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32537-RA | 961..2003 | 5..1040 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:50 Download gff for
UFO07007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32537-RA | 961..2003 | 5..1040 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:50 Download gff for
UFO07007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19273788..19274830 | 5..1040 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:20 Download gff for
UFO07007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19167821..19168863 | 5..1040 | 98 | | Minus |
