UFO07012.5prime Sequence
1112 bp (1017 high quality bases) assembled on 2009-09-15
> UFO07012.5prime
CAGTCGACATGAATCTAACGAAGTATAACTATCGAAAGTCTAAATATAAT
AAGTCTCGCATTTTGAATTGCGATAAATTGAGACCAGAAAATCTGTACAT
GAATTGCGTCGATGTTAAAGGCAAACTTTATAGCCTATCGCTAAAAAAAC
ATCATTCCAAACGAAATAAACGTCTTAAAATCAGATCTCTTCGATCCGAA
AAGTATAAATTTTCGAATATATTTAAACGCAAATCGCGAAGGCAAACAGC
TAAGAATACTACTGATAAGGGGCTAATGGATTGTGACGTAAATATGGAAC
CTTCACGATATGTGCCGCCCATTACAAATCCAATGGAAAGGATCAGCGAA
GCCGGGACTAAAAATCAACCGCATAAGTTGGAAACTGAGAAACCACGACG
ACTGCGCGGAAGGCCGAAAAATATTGTGAAATCCTCTAGTCTTATTGCTT
CAGACCATCGCAAGGAAAATCCTATGGAAATAAACGATGAACAGAAGACT
TTCACAAAGATATTAAAGAAAGTAAAGCTCAAGGTCGACGATTATTTGAA
GGACATGAAGCTGGCTGCTGCTTTTCGCAAGCAACAGAAAAAGTCGCAGC
TACAAGTTAGTCGCCGAAAATTAGGATTAGCTAAGCAGCGTCAACTAGGA
CGATCCAAAAAGGATTCATCAAAAGTGAAGGAGAGACAAATGGATGAGCA
ATCAGTGGTTATACAACAAGGTGCGGGGATTCGAGCTGCAAAACTTAAAA
AGGACCAGCAGCTATTGGAAAGAAACGTGCAGGAGGATAAAAAGAAACTG
AATTCCAGAATTTCAATGGATTGGGAAAAATTAGATAGTCCAGAAAAGGT
TAAAGAACCACCCCATTGTATTACGACGCAGTGCCCGGATTCAAGCGGCA
AAACTCAAGAAGGAGACATTGGAAGCCAATATGAGAAAGAGCAAACAGAG
AAAGTCAGTACTACTACTAAACGTATCGAAACCTAGAATCACTCACTAGC
AGTGTGTCGTTATGTCCTATGCAATTCTATTACTATCTAGTCCGCCGTAT
CGAATACATACCTGATGCCCCGAATTAACGGAGGTCTATACTATGCAAGC
TCTAGAACATCG
UFO07012.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10734-RA | 1449 | CG10734-RA | 153..1214 | 9..1061 | 5050 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16157502..16158563 | 1061..9 | 4820 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:52:19 has no hits.
UFO07012.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:41 Download gff for
UFO07012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10734-RA | 153..1228 | 9..1073 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:38 Download gff for
UFO07012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10734-RA | 153..1228 | 9..1073 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:35 Download gff for
UFO07012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10734-RA | 153..1228 | 9..1073 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:35 Download gff for
UFO07012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16157488..16158563 | 9..1073 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:38 Download gff for
UFO07012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12044993..12046068 | 9..1073 | 98 | | Minus |
