UFO07031.5prime Sequence
1127 bp (1006 high quality bases) assembled on 2009-09-15
> UFO07031.5prime
CAGTCGACATGGCCAACACTATTTCGTTAATGTCCAACGTGATACGCAAT
GTAGTGAGTAAAAAACGTATACGATACAAAGAAAAAGGATACGATTTGGA
TTTAACATACATTAATGATAACATAATTGCCATGGGCTATCCAGCACCGG
ATAAACTAGAGGGCCTATTCAGAAACCGTCTGGAAGATGTCTTTAAGCTA
TTGGAAGAGAATCATGCCCAGCATTACAAAATCTATAACCTATGCTCGGA
GCGTAGTTACGACGTTGCTAAATTTCGCGGGAGAGTAGCTGTTTATCCGT
TCGATGATCATAACCCTCCAACGATTGAGTTAATACAACGATTTTGCAGT
GATGTTGATATGTGGCTCAAGGAAGATTCGTCCAATGTTGTAGCCGTGCA
CTGTAAAGCTGGAAAGGGCAGAACCGGTACCATGATCTGCGCATATTTAG
TGTTCAGTGGAATTAAAAAATCCGCCGACGAGGCATTAGCGTGGTATGAT
GAGAAGCGTACAAAGGACCGAAAAGGTGTGACAATCCCATCTCAGCGTCG
ATATGTTCAGTATTTTTCCAAACTAGTTTGTTCAAGTGTTCCATATTCGA
AAGTAAGCCTTAACGTATGTGAAATACGCTTCTCGGAGTCCAGTTGTGTG
CAAAACTTAGGCATGGTAGAATGTTCAATATCTGTATTACACGACTCAGC
CACAGAAAATGCAAAGCCAGATAGACTGAAAACCTTGCCGATTGATTTTC
AAAAATCATTTGTTTTGACCATTAAACCATCAATACCAGTTTCCGGCGAT
GTAAAATTTGAACTCACAAAAAAATCCCCAGATAAAATCATTTGTCACTT
TTGGCTAAATACGTTTTTTGTACGAACTATTCACCTTGCGAGTCCGATGG
AACAGTTAACAAATATATACACACTTTAAGCAAATCAGAAATCGATGATG
TACATAAAGACAGTGACATAAGATTTTCAGAGATTCAGATTTCATCGTTT
GAGCAGAGATTTAGCATGATGTCAGCTGAGCGTCGAAAGAAAGAAACGAA
ATGGTTTAATTCGAGATCGAACTATGAACGTTTGTCTCCACTGCTATGCG
AAAAAGTCTTACTGCATCGCATGTAAT
UFO07031.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pten-RH | 2467 | CG5671-RH | 755..1879 | 9..1105 | 4905 | 97 | Plus |
| Pten-RG | 2617 | CG5671-RG | 912..2036 | 9..1105 | 4905 | 97 | Plus |
| Pten-RC | 1803 | CG5671-RC | 413..1537 | 9..1105 | 4905 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10258726..10258916 | 616..426 | 955 | 100 | Minus |
| 2L | 23513712 | 2L | 10259241..10259417 | 281..105 | 870 | 99.4 | Minus |
| 2L | 23513712 | 2L | 10258244..10258397 | 876..723 | 770 | 100 | Minus |
| 2L | 23513712 | 2L | 10259026..10259174 | 429..281 | 745 | 100 | Minus |
| 2L | 23513712 | 2L | 10258549..10258656 | 722..615 | 540 | 100 | Minus |
| 2L | 23513712 | 2L | 10259476..10259575 | 108..9 | 500 | 100 | Minus |
| 2L | 23513712 | 2L | 10258092..10258173 | 966..885 | 410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:06:21 has no hits.
UFO07031.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:11 Download gff for
UFO07031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pten-RB | 611..1610 | 9..1000 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:52 Download gff for
UFO07031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pten-RC | 413..1412 | 9..1000 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:52 Download gff for
UFO07031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pten-RC | 413..1412 | 9..1000 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:52 Download gff for
UFO07031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10258064..10258173 | 885..989 | 93 | <- | Minus |
| 2L | 10258235..10258397 | 723..884 | 99 | <- | Minus |
| 2L | 10258549..10258656 | 615..722 | 100 | <- | Minus |
| 2L | 10258728..10258915 | 427..614 | 100 | <- | Minus |
| 2L | 10259029..10259173 | 282..426 | 100 | <- | Minus |
| 2L | 10259241..10259413 | 109..281 | 100 | <- | Minus |
| 2L | 10259476..10259575 | 9..108 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:52 Download gff for
UFO07031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10258235..10258397 | 723..884 | 99 | <- | Minus |
| arm_2L | 10258549..10258656 | 615..722 | 100 | <- | Minus |
| arm_2L | 10258728..10258915 | 427..614 | 100 | <- | Minus |
| arm_2L | 10259029..10259173 | 282..426 | 100 | <- | Minus |
| arm_2L | 10258064..10258173 | 885..989 | 93 | <- | Minus |
| arm_2L | 10259241..10259413 | 109..281 | 100 | <- | Minus |
| arm_2L | 10259476..10259575 | 9..108 | 100 | | Minus |
