UFO07043.5prime Sequence
1121 bp (1023 high quality bases) assembled on 2009-09-15
> UFO07043.5prime
CAGTCGACATGGAATTGATTGAAACAGCTTCGACTCCTGGAGATTCCGAA
ACTGAAATCGCCATCCCGGAGGCCGCTTTCGATTCCTTTAAGATGCCTAT
GCTACCAAGTCAGTTCCATTTGGAGAACTCCATGTCTCCGGGCTACGCCA
TTAAGCACTCGCTCCTCGGTCACAGTGGTTGCGTTACTGGTCTAAAGTTT
AGTTCGAATGGCGAGAACTTGGTCAGCAGCTCCGGCGATAGGCTGCTTAA
GCTCTGGGACTTGAGCGCAACCCGATGCATTCAATCGCTGGCCGGGCACG
GAGACGGAGTCAACGATGTCGCCTGGTCGGCGGCTGGATTAATTGCCAGT
TGTAGCGATGACATGACCGTGCGTCTCTGGGATGCCCGCAGCAAGCTCTG
CGTCAAAGTTTTGGAGGGGCATTCCAGGTACAGTTTCTCCTGCTGCTTTA
ATCCGCAGGCCAATCTGCTGGCCTCCACTAGCTTTGACGAAACAGTGCGC
CTTTGGGATGTCCGCACTGGCAAAACGCTCAAAATCGTCCACGCCCACCA
GGATCCCATAACATCGGTGGACTTCCACCGCGATGGCAATATTTTTGTCA
CCAGCAGCTATGATGGGCTGGTCCGCTTGTGGGACTCTAGCACCGGGCAT
GTGCTGAAGACTCTCGTTGACGTTGACAACATCCCGGTCGGATATGTGAA
GTTCTCACCGAACGGACGCTACATCCTGTCGTCCACATTGAACAACACCC
TTAGGCTATGGAACTACAAGAAGCCCAAGTGCATGAGGACCTATCGCGGG
CATTTGAATGAGTTCTATTGCTCCAACTCCAATTTTTCCACCACCGGCGG
CATTTGGATTGTCTCCGGCAGCGAGGATAATACGCTTTGCATCTGGAATC
TGCAGACGAGGGAGCTGGTGCAAAAGATAGCACGGAGGCGACCAGATTTT
GAGCACACATTGCATCCCACGGCAAATGTGATTGCTAGCGCGCCTACAAA
TTCATATGCATTAAATCTGGAAGAGCAGCGAGAGCAGCTTTCTAGAACAT
TCGTTTGGCCGCGGGTAGTATGGTCATAATCATAATCTATCTAATCTATT
CCACTAGCCTAGGAATTGCTG
UFO07043.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10931-RA | 1202 | CG10931-RA | 84..1116 | 9..1033 | 4965 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17749018..17750002 | 9..990 | 4775 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:51:44 has no hits.
UFO07043.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:09 Download gff for
UFO07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10931-RA | 84..1123 | 9..1040 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:16 Download gff for
UFO07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10931-RA | 84..1123 | 9..1040 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:20 Download gff for
UFO07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10931-RA | 84..1123 | 9..1040 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:20 Download gff for
UFO07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17749018..17750057 | 9..1043 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:16 Download gff for
UFO07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13636523..13637562 | 9..1043 | 98 | <- | Plus |
