UFO07047.5prime Sequence
1151 bp (1028 high quality bases) assembled on 2009-09-15
> UFO07047.5prime
CAGTCGACATGGATCGCTATGAGAAGCTCAGTCGGCTGGGCGAGGGCTCC
TACGGTGTGGTCTACAAGTGCCGGGATCGGGAAACGGGTGCTCTGGTGGC
GGTCAAGAGGTTTGTGGAGTCCGAGGATGATCCAGCGATTCGTAAAATTG
CACTGCGAGAAATTAGGCTACTGAAGAACCTGAAGCATCCGAACCTTGTC
TCCCTGCTAGAAGTGTTCCGACGGAAGCGACGCCTCCATCTGGTCTTCGA
GTTCTGCGAGCTGACCGTGCTGCACGAACTGGAGCGGCATCCACAGGGCT
GCCCGGAGCACCTGACCAAACAGATCTGCTACCAGACCCTGCTGGGCGTG
GCCTACTGCCACAAGCAGGGCTGCCTACACCGCGACATCAAGCCGGAGAA
CATTCTGCTGACGGCCCAGGGTCAGGTGAAGCTGTGTGACTTCGGCTTCG
CCCGGATGCTCAGTCCGGGCGAGAATTACACGGACTACGTGGCCACCAGA
TGGTACCGGGCGCCGGAGCTGCTGGTGGGCGACACTCAGTACGGCACTCC
GGTGGACGTCTGGGCCATCGGTTGCCTCTTCGCCGAGCTGGTCCGGGGCG
AGGCCCTCTGGCCAGGACGTAGCGATGTGGATCAGCTCTATCTGATCCGC
AAGACGCTCGGCGACCTGCTGCCGCGCCACATCCAGATCTTTGGACAGAA
CGAGTACTTTAAGGGCATCACGCTGCCAGTGCCGCCGACGCTGGAGCCGC
TGGAGGACAAGATGCCGGCCAAGTCGCAGCAGAATCCCCTGACCATTGAC
TTTCTCAAGAAGTGCCTGGACAAGGATCCGACCAAGCGCTGGTCCTGCGA
GAAGCTCACAAAGCACTCCTACTTCGATGACTACATCGCTAAGCAGCGCG
AACTGGAGCACGTCAACAGCCTGGAGGCGGCCAATCTCCGCCAGCAGCAG
CTCGCCTCCCAGCAGTTCATGCTGGGCCACGCGGCCCAGCAGCTCCAGAC
GGGTCCTGCTCAAGGCGGCGCATCGCGGCGCCCGGGATAAATCAAAGACT
TCAAACACATCACTACCGCTGCTGCTTAGCACGCCAGCATCATCATCACC
GCATCAGAATTACGTGAACCCTGCAGCCCTGAAAGATGCAAACCTGTCCT
T
UFO07047.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7236-RB | 1540 | CG7236-RB | 267..1409 | 9..1146 | 5370 | 98.5 | Plus |
| CG7236-RE | 1739 | CG7236-RE | 466..1608 | 9..1146 | 5370 | 98.5 | Plus |
| CG7236-RD | 1482 | CG7236-RD | 209..1351 | 9..1146 | 5370 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5712476..5713354 | 171..1047 | 4160 | 99 | Plus |
| 2L | 23513712 | 2L | 5712257..5712424 | 9..176 | 840 | 100 | Plus |
| 2L | 23513712 | 2L | 5713414..5713486 | 1046..1118 | 225 | 93.2 | Plus |
Blast to na_te.dros performed 2014-11-28 22:19:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy10 | 6006 | gypsy10 GYPSY10 6006bp | 2271..2331 | 138..197 | 131 | 70.5 | Plus |
UFO07047.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:09 Download gff for
UFO07047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7236-RA | 321..1454 | 1..1133 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:55 Download gff for
UFO07047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7236-RD | 202..1335 | 1..1133 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:07 Download gff for
UFO07047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7236-RD | 202..1335 | 1..1133 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:07 Download gff for
UFO07047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5712250..5712424 | 1..176 | 98 | -> | Plus |
| 2L | 5712482..5713354 | 177..1047 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:55 Download gff for
UFO07047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5712250..5712424 | 1..176 | 98 | -> | Plus |
| arm_2L | 5712482..5713354 | 177..1047 | 99 | -> | Plus |
