UFO07051.5prime Sequence
1088 bp (980 high quality bases) assembled on 2009-09-15
> UFO07051.5prime
CAGTCGACATGTCCAAATATCTGATACACCTGTGCCTGGTGCTGCTCTGG
AGCTCTCGGATAAATGCAGATCACTTTGACGAATGTGACGGGATGGACGA
TGGGGCATTTGTACAAAGTTGGGAGAGCTGCCAATCCTACGTGTACTGCG
AGGGTGAGGAATCCCTAAAGGGCGATTGCGAGGATGGTGAATACTTTGAT
TCCGAGGCGGGAACCTGTGATATTGCGGCCAATGTGTCATGTTTCCTGGA
CGAAGTCGATGAACCCTCGGACCCGGAACCGGAAACAGACGAAGAAGAGG
AGGAAATACCCGCGACACCAAGACCAACCGAACCACCGATTGTGGAGACC
CCAACCGAAGTGGATATCATAAATATTGCGCCCGTTGTAAGGCCCAACTG
TCCGATCAGCGATGATCCCGGCCAGGTTATATTCATGGCCAGCAATAATT
CATGCACCAACTATTATCTCTGCTATCACGGCCATGCCATGGAAATGCAC
TGTGATAATGAGCTGTACTTTAATTCCCTCACCGGACAGTGCGATTACCC
AGATAAAGTTCAGTGTGCCTTCGAAGATCCGCGATCCCACAAGTGCCTGC
CACACATGACCGAGTTCTTTCCACATCCGGACAACTGCAATTACTTCTAC
TACTGCATCAAGGGCTTTCTGACCCTGCAACAGTGCCCCTTCTACTACGG
CTGGGACATAGAACGCCGGAGTTGTGTGCAGATAGGTGTGGCGAAATGCT
ATGGAAACTCCAGAAGAATAGGTCGGAAAGCCCCATTGCCACCCAGAAAA
CAACTCATCAAGTCTGCAAGCTTTCTAGACCATTCGTTTGGCCGCGCGGG
CCCAGGTAAGTGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGAGATCCTGGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
ACGCCCCGGCGGCACCGAGCGTTCTGAACAATCCAGATGAGTCTGAGTCA
ATACTGATCTATCACAGGAGTTCAAGCGAGCTCGATTCAGACGCCCGGCT
GGCCACTCATCGCAGTACTGTGATCATAGCCATCTGAC
UFO07051.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-H-RA | 915 | CG33983-RA | 14..820 | 9..815 | 4035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15528670..15529230 | 569..9 | 2805 | 100 | Minus |
| 3L | 28110227 | 3L | 15528360..15528605 | 815..570 | 1230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:03:15 has no hits.
UFO07051.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:06 Download gff for
UFO07051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-H-RA | 1..810 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:16 Download gff for
UFO07051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-H-RA | 7..824 | 1..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:24 Download gff for
UFO07051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-H-RA | 7..824 | 1..820 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:24 Download gff for
UFO07051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15528356..15528605 | 570..820 | 99 | <- | Minus |
| 3L | 15528670..15529237 | 1..569 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:16 Download gff for
UFO07051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15521456..15521705 | 570..820 | 99 | <- | Minus |
| arm_3L | 15521770..15522337 | 1..569 | 99 | | Minus |
