UFO07054.5prime Sequence
1133 bp (1009 high quality bases) assembled on 2009-09-15
> UFO07054.5prime
CAGTCGACATGGCCATTCTACAGAATAGCCGCCAGAGCCACAAGCAACTC
CCAATCATCAGCCAGACGATTCGCAGTGCTTGGTGCCAACAGAGGCCGAT
TAATGCCATGCATCAGGATGTCCGGCAAAAAAGCATCGGATCCGGAAACG
AGACCAAACTGGAAGCGAAGGAGACGGAAGTTCCCACCAACAGAAGAAGA
CGCAGAAGGCGTTGCAGCAGTAGCTCCACCAGCGACTCAAGCGCATCCTC
ATATTCCTCAACAGACTCGGATTCCGGGTCCTCCACCAGCAGCAGTAGCA
TAAGAAGCCAATTACCCGCCCTCAACTTGCCAGTGCCCCTCCCGCTGGCG
ACACCCACTCCGCCCGCCGTTTCATCGCCTCACCAGGCGCCATCTCCTCG
AAGGAACTCCAGCGACTCCAACCGGAGCGTCTCTCCCGTGGAGGTGCCCG
TGGATCCGCACGCTTGGACGCCCGAGGACATTGCCAGCTGGGTGAGATGG
GCGACGCGCAAGTTCAAACTGGACCCGGAGCCGGATATCGACAGGTTTCC
CAAGGATGCCCAGGAGCTGTGCGATCTGTCTCGCGCGGACTTCTGGGTCT
GTGCAGGATCAAGGCGCGGAGGCATGCTCCTGGCGCAGCACTTCGCGATC
AGCTTATACCACGCCACCGGACGGGAGACGAGTCCGATGCTCAACGACGA
CGAACCAAATCCGTACCAGCTGCTGAACGCTGCCTCGCACCGATTGGTTG
CCCAAGGCTCACGGGGCCAAATCCAGCTGTGGCAGTTTCTGCTGGAGCTG
CTCGCTGATTCGTCCAACGCGAACGCCATCAGCTGGGAGGCCAATCGGGC
GAGTTCCGGCTCATCGACCCGGACGAGGTGGCCAGGCGGTGGGGGCGAGC
GCAAGGCCAAACCGAACATGACTACGACAGCTGAGCCCGGGCACTCAGTA
CTACTACGACAGAACATCATGACCAGGTGCACGAAAGCGGTATGCCTACA
GTTGACTTCCACCGTCTGATGACGCATGCAGCTCAGCGCAGGAGGAGAAT
CGCTCAGTATGCTGGGATCTACAATCACCACGGCGCGGTGCGATGCAGTG
GTCCGCACCGCGCCATGACCACATCCAGGACCT
UFO07054.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets21C-RD | 2892 | CG2914-RD | 1067..2174 | 9..1099 | 4930 | 97.5 | Plus |
| Ets21C-RC | 4461 | CG2914-RC | 598..1705 | 9..1099 | 4930 | 97.5 | Plus |
| Ets21C-RA | 2423 | CG2914-RA | 598..1705 | 9..1099 | 4930 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 551158..551857 | 708..9 | 3500 | 100 | Minus |
| 2L | 23513712 | 2L | 548006..548218 | 921..709 | 955 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:28:20 has no hits.
UFO07054.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:03 Download gff for
UFO07054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets21C-RA | 591..1721 | 1..1114 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:39 Download gff for
UFO07054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets21C-RA | 591..1721 | 1..1114 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:53 Download gff for
UFO07054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets21C-RA | 591..1721 | 1..1114 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:53 Download gff for
UFO07054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 547978..548218 | 709..947 | 97 | <- | Minus |
| 2L | 551158..551864 | 1..708 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:39 Download gff for
UFO07054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 547978..548218 | 709..947 | 97 | <- | Minus |
| arm_2L | 551158..551864 | 1..708 | 99 | | Minus |
