UFO07060.5prime Sequence
1097 bp (994 high quality bases) assembled on 2009-09-15
> UFO07060.5prime
CAGTCGACATGTCCTACCAGAACTGGCTAAACTACCTGCAGGCGGCGGAG
AAGAACTCCATGATAAGTGGCCGCGCCCGCAAGGTGCTCTACAAATTCCC
GGACGGCAGGCAAATGGCCGAGGAGTACAACATGGACACGGGAATCGTGC
AGCGGCGGGCCTGGAAATCGAAGAGCAACAAGATCATGGGCGAGTCGGAG
TGGGAAATCGAGCTGGGCGATGAGCCGCGTCAGTTAAACTGGTCGGGCAA
CAAGCCACCAGGATCTGGCGAGGAAACGGACTCCCTGGCCGGCGGAGATT
TCACCCTGCGGGAGAGCAACACCGCGCCACTGCTGACCAAGCGGATCACC
AAGAAGAACATTGAGTGGCGCATCCGCAACATGCCCTACTCCCTGGACAC
ATACAGCGTAACCGCCGATCCCGAGAAGCGTGCCATAGTCGTGCGCACCT
CGAACAAGAAGTACTACAAGGTCATCCCGGTCCCGGAACTGGACCGCTGT
GGGGTCAAGCCCGCGCAGGAGAGCCTCTCTGTCCACCACCAGTTCAACAC
GCTGATCATTACCTACCAGAAACCAGATATCCTCTGCGAGATGGAGGCAC
AGGTGCTGCTTCTGCTCAAGAATGTCGACACCGAAACCGACATGGATGAT
CTGCTGAAGGGTCTGATGGCCAAAGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAATTACGCCCGCCCTGCCACTCATCGCAGTACTGTTGTACTCATT
AGCATTCTGCCGACATGGAAGCATCACAAACGCATGATGACCTGATCGCA
GCGCATCAGCACTGTCGCTGCGTATATATTTGCATGTGAAACGGGGGCGA
GAGTGTCATATGCCGTCATCAACTGTAACTCACAGGATGCTGAACAA
UFO07060.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13901-RB | 919 | CG13901-RB | 135..800 | 9..674 | 3330 | 100 | Plus |
| CG13901-RA | 911 | CG13901-RA | 127..792 | 9..674 | 3330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 836786..837451 | 674..9 | 3330 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:45:28 has no hits.
UFO07060.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:07 Download gff for
UFO07060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13901-RA | 59..732 | 1..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:43 Download gff for
UFO07060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13901-RA | 122..795 | 1..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:01 Download gff for
UFO07060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13901-RA | 122..795 | 1..678 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:01 Download gff for
UFO07060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 836782..837456 | 1..678 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:43 Download gff for
UFO07060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 836782..837456 | 1..678 | 99 | | Minus |
