UFO07064.5prime Sequence
1138 bp (1007 high quality bases) assembled on 2009-09-15
> UFO07064.5prime
CAGTCGACATGGCGCTCCAGTGCCGGACCTGCGGCAGCATCATCTACAAT
AAAATGCCCAAGAATCTCTTTCATATTGAGAACGAGAAGATGCTGCAAGA
CATAAATCTTGTCACTGGCACAACACTCCACAACGATCCAGAGCTGCCCA
GCAGCATATGCGCCTGCTGCACGCTTGACTTGAACCAAGCGATTTTGTTC
CGGGAGCGGTGCATCCTAACGCAGAAGCAGCTCGTCCATCGTCGTAGATC
TCCCGAAGCGAAGGAACCGGCTGAAGATGTTGAGGAGATGGCATCACCGC
CGGATTGTCTGAACGATCCATTCGGGGAAGTCGATGAATACATTGTGGAA
TCCCCAGAAGAAGTTTTGGATCATGATAGTGATGCTCATCATGATCTGGA
TGAGGATAATTATATTGATTCTGTTGAAGATGTTGATGCGCTTCAAGATA
TGGCTGAAGTAGCCGAAGAGGATTCTCAAGATGTCGAATCTCTGATCTCA
AGTGTACAGAAAGAACTTGAGAGCATTTGCAACGACGACAGCAACTCGGA
TAACAACGATTACATGGAGCCCCAAAACGGTTCCTATTTCAATGAAACTA
TAAACGAATATGAAGTATCATCGAACCCAAACACACCGCTGCCCGAATCG
AAGAGTGCAGCAGGTCGGTCAACGAAGCCAGCGACCACAAAACCCAAGCG
GAAAAAACAGTACGTTACGTGGAAAAATATGACCGAGGAGCAGATCATAG
AGCGTAAGCGACTGCAGCGTAAACGCGAGTGTGTTTGCGAACAGTGCGGC
CGGCAATTCACCGACCAAAGCAATTTCAAGCTTCACATGCTGCGGCACAC
GGGCAATAAGAACTTCGCCTGCCAGCAGTGTGGCAAGCGGTTCTACACCG
ACCATCTCATGACGCTGCACAACGAATCATTCACCATGGCGAGAAGCCAT
ACGACTGCGCTTTTGCACAGTCCTTTCACATAGCAACACTCGCTCATCAC
GAAAGACTCACACCATGCAAACCCTACAGCTGTCATCATGCGATAAATGT
TTTAGTCAGCTCGACGCAGCCGCACGACTATCATACAGGAGGCGAGCTTG
CTGACATCTGCAACATCTCAGCCAACTCAGTAAGCCAT
UFO07064.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18764-RA | 1378 | CG18764-RA | 106..1214 | 9..1097 | 5035 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11627166..11628038 | 126..993 | 4135 | 99.3 | Plus |
| 3R | 32079331 | 3R | 11626994..11627110 | 9..125 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:51:19 has no hits.
UFO07064.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:30 Download gff for
UFO07064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18764-RA | 63..1137 | 9..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:16:13 Download gff for
UFO07064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18764-RA | 106..1180 | 9..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:56 Download gff for
UFO07064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18764-RA | 106..1180 | 9..1068 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:56 Download gff for
UFO07064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11626994..11627110 | 9..125 | 100 | -> | Plus |
| 3R | 11627166..11628052 | 126..1005 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:16:13 Download gff for
UFO07064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7452716..7452832 | 9..125 | 100 | -> | Plus |
| arm_3R | 7452888..7453774 | 126..1005 | 99 | -> | Plus |
