UFO07071.5prime Sequence
895 bp (50 high quality bases) assembled on 2009-09-15
> UFO07071.5prime
CAATCCACATGAAATACCTAATCGTTTTTGCACTCTTCTGCTGTCTTGTG
GCATCATTTTTTGCGACTTTGAAAAACCCAATCTGTGGCGAGGAGTTTGG
CGTCAAGGGTACTTGCCGTTCCCTGCAACCCATGTGGACCTATCGCCCAG
ATACGAACGAGTGCTTCACCTTCAATTACTCCGGCTGCCACGGAAACAAT
AATCTATTCCACAAAAAGTTGGAGTGCGAAGAAAAATGCAAAATAGCAAG
CTTTCTACACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAAC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATATCAAATTACCCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCAT
CACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCG
CCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTC
CATATTGGCCACGTTTGATCAAAACTGGTGAAACTCACCCAGGGATTGGC
TGAGACGAAAAACATATTCTCAATAAACCCTTTAGGAAATAGGCCAGGTT
TTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAACCTGCCGGA
AATCGTCGTGCTATTCACTCCAGAACGATGAAAACGTATCAGATTGCACA
TGTAAAACTGTGTAACATGGTGAACACTATCCCGTATCACCAGCT
UFO07071.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16704-RB | 350 | CG16704-RB | 41..284 | 2..245 | 1115 | 97.1 | Plus |
| CG16704-RA | 335 | CG16704-RA | 41..284 | 2..245 | 1115 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3692189..3692355 | 245..79 | 835 | 100 | Minus |
| 2L | 23513712 | 2L | 3692471..3692547 | 78..2 | 280 | 90.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:45:10 has no hits.
UFO07071.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:59 Download gff for
UFO07071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16704-RA | 41..289 | 1..250 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:35 Download gff for
UFO07071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16704-RA | 40..288 | 1..250 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:50 Download gff for
UFO07071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16704-RA | 40..288 | 1..250 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:13:50 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:37:35 has no hits.
